Calcium in PDB 8w8y: Cryo-Em Structure of Gamma-Msh-MC3R-GS_NB35 Complex

The binding sites of Calcium atom in the Cryo-Em Structure of Gamma-Msh-MC3R-GS_NB35 Complex (pdb code 8w8y). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Cryo-Em Structure of Gamma-Msh-MC3R-GS_NB35 Complex, PDB code: 8w8y:

Calcium binding site 1 out of 1 in the Cryo-Em Structure of Gamma-Msh-MC3R-GS_NB35 Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryo-Em Structure of Gamma-Msh-MC3R-GS_NB35 Complex within 5.0Å range: probe atom residue distance (Å) B Occ R:Ca501 b:115.3 occ:1.00 OD2 R:ASP121 2.3 117.8 1.0 O L:GLY4 3.2 125.0 1.0 OD2 R:ASP117 3.2 132.9 1.0 CG R:ASP121 3.3 118.3 1.0 OD1 R:ASP121 3.5 118.9 1.0 OE2 R:GLU94 3.8 123.5 1.0 C L:GLY4 3.8 124.7 1.0 CG R:ASP117 4.0 132.7 1.0 N L:GLY4 4.0 127.4 1.0 CA L:GLY4 4.0 125.4 1.0 N L:ARG7 4.1 109.7 1.0 C L:PHE6 4.1 113.0 1.0 CB R:ASP117 4.2 131.1 1.0 CA L:PHE6 4.4 112.2 1.0 NH1 L:ARG7 4.5 115.3 1.0 O L:PHE6 4.5 116.1 1.0 CA L:ARG7 4.5 111.2 1.0 N L:PHE6 4.6 113.1 1.0 CZ L:ARG7 4.6 113.6 1.0 O R:ASP117 4.7 133.4 1.0 NH2 L:ARG7 4.7 110.7 1.0 CB R:ASP121 4.7 114.8 1.0 CB L:ARG7 4.8 113.3 1.0 C L:HIS5 4.9 119.3 1.0 N L:HIS5 4.9 118.4 1.0 CD R:GLU94 5.0 124.5 1.0 OD1 R:ASP117 5.0 134.2 1.0

F.Jingpeng, H.Hongli. Structure Basis of Ligand Selectivity and Signal Transduction in Human Melanocortin-3 Receptor To Be Published.