Atomistry » Calcium » PDB 8t2r-9rnt » 8wpg
Atomistry »
  Calcium »
    PDB 8t2r-9rnt »
      8wpg »

Calcium in PDB 8wpg: Human Calcium-Sensing Receptor Bound with Cinacalcet in Detergent

Other elements in 8wpg:

The structure of Human Calcium-Sensing Receptor Bound with Cinacalcet in Detergent also contains other interesting chemical elements:

Fluorine (F) 6 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Human Calcium-Sensing Receptor Bound with Cinacalcet in Detergent (pdb code 8wpg). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the Human Calcium-Sensing Receptor Bound with Cinacalcet in Detergent, PDB code: 8wpg:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in 8wpg

Go back to Calcium Binding Sites List in 8wpg
Calcium binding site 1 out of 4 in the Human Calcium-Sensing Receptor Bound with Cinacalcet in Detergent


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Human Calcium-Sensing Receptor Bound with Cinacalcet in Detergent within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca905

b:98.6
occ:1.00
O B:LEU87 2.5 71.7 1.0
O B:SER84 2.8 72.0 1.0
O B:LEU88 2.8 76.4 1.0
O B:ILE81 2.9 62.6 1.0
O B:ASN82 3.4 55.5 1.0
C B:LEU88 3.6 74.1 1.0
C B:LEU87 3.7 68.8 1.0
O B:LEU91 3.8 81.4 1.0
C B:ASN82 3.9 55.3 1.0
C B:SER84 3.9 71.6 1.0
CA B:ASN82 3.9 53.4 1.0
C B:ILE81 4.0 58.0 1.0
CB B:LEU88 4.3 73.8 1.0
CA B:LEU88 4.3 72.6 1.0
N B:PRO89 4.3 84.6 1.0
N B:ASN82 4.4 48.6 1.0
N B:LEU88 4.4 70.8 1.0
CA B:PRO85 4.4 70.8 1.0
CA B:PRO89 4.5 81.6 1.0
N B:PRO85 4.6 74.7 1.0
N B:SER84 4.7 69.3 1.0
CA B:LEU87 4.8 68.7 1.0
N B:LEU87 4.9 74.9 1.0
CG2 B:ILE81 4.9 50.3 1.0
OD1 B:ASN82 4.9 55.3 1.0
CA B:SER84 4.9 72.4 1.0
C B:PRO85 4.9 74.5 1.0
N B:SER83 5.0 62.8 1.0

Calcium binding site 2 out of 4 in 8wpg

Go back to Calcium Binding Sites List in 8wpg
Calcium binding site 2 out of 4 in the Human Calcium-Sensing Receptor Bound with Cinacalcet in Detergent


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Human Calcium-Sensing Receptor Bound with Cinacalcet in Detergent within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca906

b:123.3
occ:1.00
O B:GLY557 2.4 105.8 1.0
C B:GLY557 3.5 100.6 1.0
OD1 A:ASP234 3.7 67.3 1.0
O A:GLU231 4.1 56.7 1.0
CA B:GLY557 4.2 98.6 1.0
OE2 B:GLU558 4.4 91.5 1.0
N B:GLU558 4.5 88.5 1.0
O A:GLU232 4.6 57.8 1.0
CA B:GLU558 4.7 84.5 1.0
CG A:ASP234 4.8 67.3 1.0

Calcium binding site 3 out of 4 in 8wpg

Go back to Calcium Binding Sites List in 8wpg
Calcium binding site 3 out of 4 in the Human Calcium-Sensing Receptor Bound with Cinacalcet in Detergent


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Human Calcium-Sensing Receptor Bound with Cinacalcet in Detergent within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca907

b:98.2
occ:1.00
O A:GLY557 2.6 96.8 1.0
OD1 B:ASP234 2.8 64.7 1.0
CG B:ASP234 3.4 62.1 1.0
OD2 B:ASP234 3.5 59.3 1.0
C A:GLY557 3.6 95.5 1.0
O B:GLU231 4.1 62.6 1.0
CA A:GLY557 4.1 94.3 1.0
N A:GLU558 4.6 90.5 1.0
CB B:ASP234 4.7 55.0 1.0
O B:GLU232 4.8 58.1 1.0
CA B:ASP234 4.9 57.0 1.0
OE2 A:GLU558 4.9 92.2 1.0
N B:ASP234 4.9 51.8 1.0
CA A:GLU558 4.9 89.0 1.0

Calcium binding site 4 out of 4 in 8wpg

Go back to Calcium Binding Sites List in 8wpg
Calcium binding site 4 out of 4 in the Human Calcium-Sensing Receptor Bound with Cinacalcet in Detergent


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Human Calcium-Sensing Receptor Bound with Cinacalcet in Detergent within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca904

b:96.5
occ:1.00
O A:SER84 2.3 72.6 1.0
O A:ILE81 2.9 59.9 1.0
N A:LEU88 2.9 72.0 1.0
O A:LEU88 3.3 82.0 1.0
C A:LEU88 3.4 76.7 1.0
CA A:LEU88 3.5 75.0 1.0
C A:SER84 3.6 71.6 1.0
CB A:LEU88 3.8 74.8 1.0
OG A:SER84 3.9 66.5 1.0
C A:LEU87 3.9 75.0 1.0
N A:LEU87 3.9 73.4 1.0
CB A:LEU87 4.0 68.9 1.0
C A:ILE81 4.0 56.7 1.0
CA A:PRO85 4.1 76.5 1.0
CA A:LEU87 4.1 70.3 1.0
N A:PRO89 4.2 83.3 1.0
N A:PRO85 4.3 78.1 1.0
C A:PRO85 4.3 77.3 1.0
O A:ASN82 4.3 58.7 1.0
CG2 A:ILE81 4.5 50.6 1.0
CA A:ASN82 4.6 53.1 1.0
CA A:SER84 4.6 71.2 1.0
C A:ASN82 4.6 58.8 1.0
N A:ALA86 4.6 81.0 1.0
O A:PRO85 4.7 75.6 1.0
N A:ASN82 4.8 54.1 1.0
CA A:PRO89 4.8 83.1 1.0
N A:SER84 4.8 68.0 1.0
CB A:SER84 4.9 69.0 1.0
O A:LEU91 5.0 73.3 1.0
CA A:ILE81 5.0 54.7 1.0
CG A:LEU88 5.0 70.8 1.0

Reference:

S.Ling, X.Meng, Y.Zhang, Z.Xia, Y.Zhou, F.Yang, P.Shi, C.Shi, C.Tian. Structural Insights Into Asymmetric Activation of the Calcium-Sensing Receptor-G Q Complex. Cell Res. 2023.
ISSN: ISSN 1001-0602
PubMed: 37919470
DOI: 10.1038/S41422-023-00892-2
Page generated: Thu Dec 28 01:51:39 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy