Atomistry » Calcium » PDB 8znz-9awu » 9awn
Atomistry »
  Calcium »
    PDB 8znz-9awu »
      9awn »

Calcium in PDB 9awn: Crystal Structure of Trypsin at 250 Kelvin with Benzamidine

Enzymatic activity of Crystal Structure of Trypsin at 250 Kelvin with Benzamidine

All present enzymatic activity of Crystal Structure of Trypsin at 250 Kelvin with Benzamidine:
3.4.21.4;

Protein crystallography data

The structure of Crystal Structure of Trypsin at 250 Kelvin with Benzamidine, PDB code: 9awn was solved by L.M.T.R.Lima, F.De Sa Ribeiro, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.49 / 1.48
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 53.884, 56.774, 66.223, 90, 90, 90
R / Rfree (%) 22.2 / 25.5

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Trypsin at 250 Kelvin with Benzamidine (pdb code 9awn). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Trypsin at 250 Kelvin with Benzamidine, PDB code: 9awn:

Calcium binding site 1 out of 1 in 9awn

Go back to Calcium Binding Sites List in 9awn
Calcium binding site 1 out of 1 in the Crystal Structure of Trypsin at 250 Kelvin with Benzamidine


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Trypsin at 250 Kelvin with Benzamidine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca301

b:9.4
occ:1.00
OE1 A:GLU52 2.2 9.7 1.0
OE2 A:GLU62 2.3 10.7 1.0
O A:VAL57 2.3 11.4 1.0
O A:ASN54 2.3 12.8 1.0
CD A:GLU52 3.3 9.8 1.0
CD A:GLU62 3.3 13.8 1.0
C A:VAL57 3.4 13.2 1.0
C A:ASN54 3.5 11.8 1.0
OE2 A:GLU52 3.7 9.8 1.0
CG A:GLU62 3.7 12.6 1.0
CA A:VAL58 4.0 15.0 1.0
N A:GLU59 4.1 16.0 1.0
N A:VAL58 4.1 14.7 1.0
OE1 A:GLU59 4.2 16.2 1.0
N A:VAL57 4.3 12.1 1.0
CA A:ILE55 4.3 12.3 1.0
N A:ASN54 4.3 10.9 1.0
CG A:GLU59 4.3 18.8 1.0
N A:ILE55 4.4 11.3 1.0
CA A:ASN54 4.4 11.0 1.0
O A:HOH455 4.4 13.1 1.0
CA A:VAL57 4.4 12.7 1.0
OE1 A:GLU62 4.5 12.9 1.0
C A:ILE55 4.5 12.0 1.0
N A:ASP53 4.5 9.9 1.0
C A:VAL58 4.6 16.9 1.0
CG A:GLU52 4.6 9.6 1.0
CD A:GLU59 4.7 20.5 1.0
CB A:GLU59 4.7 17.5 1.0
CA A:GLU52 4.7 8.7 1.0
CB A:ASN54 4.7 10.9 1.0
O A:ILE55 4.8 11.0 1.0
CB A:GLU52 4.8 9.7 1.0
N A:ASN56 4.9 11.7 1.0
C A:ASP53 4.9 10.6 1.0

Reference:

L.M.T.R.Lima, F.De Sa Ribeiro. Crystal Structure of Trypsin at 250 Kelvin with Benzamidine To Be Published.
Page generated: Thu Jul 10 08:51:01 2025

Last articles

Cl in 5L67
Cl in 5L68
Cl in 5L65
Cl in 5L62
Cl in 5L64
Cl in 5L63
Cl in 5L5Z
Cl in 5L61
Cl in 5L5Y
Cl in 5L60
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy