Calcium in PDB 9ayg: Cryo-Em Structure of Apo State Human CAV3.2

The binding sites of Calcium atom in the Cryo-Em Structure of Apo State Human CAV3.2 (pdb code 9ayg). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Cryo-Em Structure of Apo State Human CAV3.2, PDB code: 9ayg:

Calcium binding site 1 out of 1 in the Cryo-Em Structure of Apo State Human CAV3.2


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryo-Em Structure of Apo State Human CAV3.2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca2403 b:30.0 occ:1.00 OE2 A:GLU378 2.3 45.2 1.0 OD1 A:ASP1504 2.6 24.7 1.0 OE1 A:GLU974 3.3 37.2 1.0 CD A:GLU378 3.3 42.0 1.0 OE1 A:GLU378 3.7 31.5 1.0 CG A:ASP1504 3.8 24.1 1.0 N A:ASN1809 3.9 31.3 1.0 O A:GLY1807 4.2 37.9 1.0 CD A:GLU974 4.2 36.6 1.0 OD1 A:ASP1808 4.3 23.3 1.0 OE2 A:GLU974 4.5 36.8 1.0 CA A:ASP1504 4.5 16.4 1.0 CA A:ASN1809 4.5 17.4 1.0 CB A:ASP1504 4.6 28.2 1.0 CG A:GLU378 4.6 31.3 1.0 OD2 A:ASP1504 4.7 28.8 1.0 CA A:ASP1808 4.7 30.4 1.0 N A:GLY1505 4.8 23.4 1.0 C A:ASP1808 4.8 32.8 1.0 O A:GLN973 4.9 45.0 1.0 OD1 A:ASP975 5.0 41.5 1.0

J.Huang, X.Fan, X.Jin, C.Lyu, Q.Guo, T.Liu, J.Chen, A.Davakan, P.Lory, N.Yan. Structural Basis For Human Ca V 3.2 Inhibition By Selective Antagonists. Cell Res. 2024.
ISSN: ISSN 1001-0602
PubMed: 38605177
DOI: 10.1038/S41422-024-00959-8