Calcium in PDB 9b2z: Actin-Bound Legionella Pneumophila Ampylase Lnab with Ampylated Catalytic Histidine

The binding sites of Calcium atom in the Actin-Bound Legionella Pneumophila Ampylase Lnab with Ampylated Catalytic Histidine (pdb code 9b2z). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Actin-Bound Legionella Pneumophila Ampylase Lnab with Ampylated Catalytic Histidine, PDB code: 9b2z:

Calcium binding site 1 out of 1 in the Actin-Bound Legionella Pneumophila Ampylase Lnab with Ampylated Catalytic Histidine


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Actin-Bound Legionella Pneumophila Ampylase Lnab with Ampylated Catalytic Histidine within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca400 b:29.2 occ:1.00 O1B B:ATP402 2.4 33.0 1.0 O2G B:ATP402 3.5 33.0 1.0 O3G B:ATP402 3.5 33.0 1.0 OE1 B:GLN137 3.6 23.1 1.0 OD2 B:ASP154 3.8 26.0 1.0 PB B:ATP402 3.9 33.0 1.0 PG B:ATP402 4.0 33.0 1.0 CD B:GLN137 4.1 23.1 1.0 OD2 B:ASP11 4.2 25.4 1.0 O B:ASN12 4.2 28.8 1.0 O3B B:ATP402 4.4 33.0 1.0 CG2 B:VAL339 4.5 23.3 1.0 O3A B:ATP402 4.5 33.0 1.0 NE2 B:GLN137 4.5 23.1 1.0 OD1 B:ASP11 4.6 25.4 1.0 O1A B:ATP402 4.8 33.0 1.0 NZ B:LYS18 4.8 27.3 1.0 CG B:ASP11 4.8 25.4 1.0 CG B:GLN137 4.8 23.1 1.0 CG B:ASP154 4.9 26.0 1.0 CB B:GLN137 5.0 23.1 1.0 CA B:GLY13 5.0 33.0 1.0

Z.Zhang, R.Patel, Z.Q.Luo, C.Das. Cryo-Em Detection of Ampylated Histidine Implies Covalent Catalysis in Ampylation Mediated By A Bacterial Effector. J.Mol.Biol. V. 437 68917 2024.
ISSN: ESSN 1089-8638
PubMed: 39694182
DOI: 10.1016/J.JMB.2024.168917