Calcium in PDB 9buj: Structure of PFPL1 From Pseudoalteromonas Fuliginea

The structure of Structure of PFPL1 From Pseudoalteromonas Fuliginea, PDB code: 9buj was solved by A.B.Boraston, J.K.Hobbs, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.50 / 2.19
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	48.504, 58.137, 149.08, 90, 90, 90
R / Rfree (%)	18.2 / 25.2

The binding sites of Calcium atom in the Structure of PFPL1 From Pseudoalteromonas Fuliginea (pdb code 9buj). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of PFPL1 From Pseudoalteromonas Fuliginea, PDB code: 9buj:

Calcium binding site 1 out of 1 in the Structure of PFPL1 From Pseudoalteromonas Fuliginea


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of PFPL1 From Pseudoalteromonas Fuliginea within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca501 b:33.2 occ:1.00 O A:HOH753 2.3 33.4 1.0 O A:ILE434 2.3 32.8 1.0 OD1 A:ASP436 2.4 35.4 1.0 OD1 A:ASP428 2.4 33.5 1.0 OD1 A:ASN430 2.4 34.2 1.0 OD1 A:ASP432 2.4 33.3 1.0 CG A:ASP432 3.4 32.7 1.0 CG A:ASN430 3.4 33.2 1.0 C A:ILE434 3.5 31.4 1.0 CG A:ASP428 3.6 31.6 1.0 CG A:ASP436 3.6 36.2 1.0 OD2 A:ASP432 3.7 37.5 1.0 ND2 A:ASN430 3.8 31.3 1.0 N A:ILE434 3.9 30.2 1.0 N A:ASP436 4.0 29.4 1.0 CA A:ASP428 4.0 37.6 1.0 CA A:ILE434 4.0 32.8 1.0 CB A:ILE434 4.1 31.8 1.0 O A:HOH775 4.2 37.0 1.0 CA A:ASP436 4.2 34.0 1.0 N A:ASP432 4.3 30.2 1.0 CB A:ASP428 4.3 32.9 1.0 OD2 A:ASP436 4.4 35.4 1.0 C A:ASP428 4.4 37.8 1.0 OD2 A:ASP428 4.5 33.5 1.0 C A:ASN435 4.5 33.9 1.0 O A:HOH604 4.5 33.5 1.0 CB A:ASP436 4.5 35.5 1.0 N A:ASN430 4.5 34.7 1.0 N A:ASN435 4.6 31.3 1.0 CB A:ASP432 4.6 29.6 1.0 CG2 A:ILE434 4.6 29.4 1.0 N A:LYS431 4.7 36.5 1.0 N A:LYS429 4.7 36.9 1.0 O A:ILE427 4.7 37.2 1.0 O A:HOH771 4.7 41.1 1.0 CB A:ASN430 4.8 31.3 1.0 CA A:ASP432 4.8 28.6 1.0 N A:GLY433 4.8 32.5 1.0 CA A:ASN435 5.0 31.9 1.0 C A:ASP432 5.0 32.9 1.0 O A:ASP428 5.0 38.4 1.0

J.K.Hobbs, A.B.Boraston. The Structure of A Pectin-Active Family 1 Polysaccharide Lyase From the Marine Bacterium Pseudoalteromonas Fuliginea. Acta Crystallogr.,Sect.F 2024.
ISSN: ESSN 2053-230X
PubMed: 38935515
DOI: 10.1107/S2053230X2400596X