Atomistry » Calcium » PDB 9cts-9dyj » 9cu9
Atomistry »
  Calcium »
    PDB 9cts-9dyj »
      9cu9 »

Calcium in PDB 9cu9: Crystal Structure of Staphylococcal Nuclease Variant Delta+Phs V23D/L36K at Cryogenic Temperature

Enzymatic activity of Crystal Structure of Staphylococcal Nuclease Variant Delta+Phs V23D/L36K at Cryogenic Temperature

All present enzymatic activity of Crystal Structure of Staphylococcal Nuclease Variant Delta+Phs V23D/L36K at Cryogenic Temperature:
3.1.31.1;

Protein crystallography data

The structure of Crystal Structure of Staphylococcal Nuclease Variant Delta+Phs V23D/L36K at Cryogenic Temperature, PDB code: 9cu9 was solved by Y.Zhang, J.L.Schlessman, A.C.Robinson, B.Garcia-Moreno E., with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.26 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 31.081, 60.256, 38.731, 90, 94.75, 90
R / Rfree (%) 18.9 / 22.2

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Staphylococcal Nuclease Variant Delta+Phs V23D/L36K at Cryogenic Temperature (pdb code 9cu9). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Staphylococcal Nuclease Variant Delta+Phs V23D/L36K at Cryogenic Temperature, PDB code: 9cu9:

Calcium binding site 1 out of 1 in 9cu9

Go back to Calcium Binding Sites List in 9cu9
Calcium binding site 1 out of 1 in the Crystal Structure of Staphylococcal Nuclease Variant Delta+Phs V23D/L36K at Cryogenic Temperature


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Staphylococcal Nuclease Variant Delta+Phs V23D/L36K at Cryogenic Temperature within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca202

b:40.5
occ:1.00
 OD2 A:ASP21 2.0 32.9 1.0
OE2 A:GLU43 2.2 59.9 1.0
O A:THR41 2.6 29.0 1.0
OD1 A:ASP40 2.9 28.9 1.0
O A:HOH305 3.1 28.5 1.0
CG A:ASP21 3.2 28.5 1.0
CD A:GLU43 3.5 62.8 1.0
C A:THR41 3.8 25.8 1.0
O4P A:THP201 3.8 24.7 1.0
OG1 A:THR41 3.9 29.9 1.0
N A:THR41 4.0 18.3 1.0
CB A:ASP21 4.0 22.0 1.0
CG A:ASP40 4.1 28.3 1.0
OD1 A:ASP21 4.1 32.3 1.0
OE1 A:GLU43 4.2 57.0 1.0
NH2 A:ARG35 4.4 15.8 1.0
CA A:THR41 4.4 24.5 1.0
O5P A:THP201 4.4 22.4 1.0
P2 A:THP201 4.5 22.5 1.0
O A:HOH355 4.6 38.9 1.0
CG A:GLU43 4.6 54.9 1.0
C A:ASP40 4.7 19.1 1.0
C A:PRO42 4.7 30.9 1.0
OD2 A:ASP40 4.7 33.6 1.0
O A:HOH317 4.8 30.0 1.0
N A:GLU43 4.8 38.1 1.0
CA A:ASP40 4.8 19.5 1.0
CB A:THR41 4.8 26.1 1.0
N A:PRO42 4.8 28.0 1.0
O A:PRO42 4.9 31.3 1.0
CZ A:ARG35 4.9 17.3 1.0

Reference:

Y.Zhang, J.L.Schlessman, A.C.Robinson, B.Garcia-Moreno E.. Crystal Structure of Staphylococcal Nuclease Variant Delta+Phs V23D/L36K at Cryogenic Temperature To Be Published.
Page generated: Thu Jul 10 09:09:59 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy