Calcium in PDB 9eab: Seneca Valley Virus Altered Particle at Physiological Condition (A- Particle[P])

The binding sites of Calcium atom in the Seneca Valley Virus Altered Particle at Physiological Condition (A- Particle[P]) (pdb code 9eab). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Seneca Valley Virus Altered Particle at Physiological Condition (A- Particle[P]), PDB code: 9eab:

Calcium binding site 1 out of 1 in the Seneca Valley Virus Altered Particle at Physiological Condition (A- Particle[P])


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Seneca Valley Virus Altered Particle at Physiological Condition (A- Particle[P]) within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca500 b:70.5 occ:1.00 OG1 B:THR5 4.5 121.7 1.0 HB3 B:PRO7 4.7 117.6 1.0 HD3 B:PRO7 4.8 116.3 1.0 HB B:THR5 4.9 115.3 1.0

R.Kumaran, N.Jayawardena, K.L.Chen, A.R.Eruera, J.Hodgkinson-Bean, L.N.Burga, M.Wolf, M.Bostina. Cryo-Em Structure of the Seneca Valley Virus A-Particle and Related Structural States J.Virol. 2025.
ISSN: ESSN 1098-5514
DOI: 10.1128/JVI.00744-25