Calcium in PDB 9evc: Cryoem Structure of LMCA1 in E1-Ca State

All present enzymatic activity of Cryoem Structure of LMCA1 in E1-Ca State:
7.2.2.10;

The binding sites of Calcium atom in the Cryoem Structure of LMCA1 in E1-Ca State (pdb code 9evc). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Cryoem Structure of LMCA1 in E1-Ca State, PDB code: 9evc:

Calcium binding site 1 out of 1 in the Cryoem Structure of LMCA1 in E1-Ca State


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryoem Structure of LMCA1 in E1-Ca State within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca901 b:41.1 occ:1.00 O A:ILE290 2.1 46.0 1.0 OD1 A:ASN716 2.3 41.1 1.0 O A:VAL287 2.5 44.8 1.0 OD2 A:ASP720 2.6 44.5 1.0 OE1 A:GLU292 2.6 51.5 1.0 O A:ALA288 2.8 42.1 1.0 CG A:ASP720 3.1 44.5 1.0 C A:ILE290 3.3 46.0 1.0 CG A:ASN716 3.3 41.1 1.0 CD A:GLU292 3.4 51.5 1.0 C A:ALA288 3.5 42.1 1.0 OE2 A:GLU292 3.5 51.5 1.0 OD1 A:ASP720 3.6 44.5 1.0 C A:VAL287 3.7 44.8 1.0 ND2 A:ASN716 3.8 41.1 1.0 CB A:ASP720 3.8 44.5 1.0 CA A:ALA288 3.9 42.1 1.0 N A:ILE290 4.0 46.0 1.0 ND2 A:ASN688 4.1 35.5 1.0 N A:PRO291 4.2 45.0 1.0 CA A:ILE290 4.2 46.0 1.0 CA A:PRO291 4.2 45.0 1.0 N A:GLU292 4.2 51.5 1.0 N A:ALA288 4.3 42.1 1.0 C A:ALA289 4.3 44.8 1.0 N A:ALA289 4.4 44.8 1.0 CB A:ASN716 4.6 41.1 1.0 CG A:GLU292 4.7 51.5 1.0 O A:ALA289 4.8 44.8 1.0 C A:PRO291 4.8 45.0 1.0 CB A:ILE290 4.8 46.0 1.0 CA A:ALA289 4.9 44.8 1.0 CA A:VAL287 4.9 44.8 1.0 CG A:ASN688 4.9 35.5 1.0 OD1 A:ASN688 4.9 35.5 1.0

I.Prabudiansyah, F.Oradd, K.Magkakis, K.Pounot, M.Levantino, M.Andersson. Dephosphorylation and Ion Binding in Prokaryotic Calcium Transport Sci Adv 2024.
ISSN: ESSN 2375-2548
DOI: 10.1126/SCIADV.ADP2916