Calcium in PDB 9f0g: Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III

Enzymatic activity of Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III

All present enzymatic activity of Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III:
4.99.1.9;

Protein crystallography data

The structure of Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III, PDB code: 9f0g was solved by T.Gabler, S.Hofbauer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.61 / 1.85
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 37.534, 68.09, 63.2, 90, 102.71, 90
R / Rfree (%) 17.2 / 21.9

Other elements in 9f0g:

The structure of Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III also contains other interesting chemical elements:

Iron (Fe) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III (pdb code 9f0g). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III, PDB code: 9f0g:

Calcium binding site 1 out of 1 in 9f0g

Go back to Calcium Binding Sites List in 9f0g
Calcium binding site 1 out of 1 in the Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca403

b:75.0
occ:1.00
O A:HOH632 2.5 48.6 1.0
O A:HOH536 2.7 43.8 1.0
O A:HOH634 2.9 47.5 1.0
OD2 A:ASP267 3.9 39.8 1.0
OE1 A:GLU271 3.9 36.4 1.0
CA A:SER221 4.1 36.6 1.0
OE2 A:GLU271 4.2 40.1 1.0
O A:HOH532 4.2 33.3 1.0
O A:GLU222 4.3 34.0 1.0
CG A:ASP267 4.3 33.5 1.0
CD A:GLU271 4.5 39.4 1.0
OD1 A:ASP267 4.5 45.4 1.0
N A:SER221 4.6 25.7 1.0
C A:SER221 4.6 34.2 1.0
N A:GLU222 4.6 30.8 1.0
O A:HOH514 5.0 38.6 1.0

Reference:

T.Gabler, S.Hofbauer. Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III To Be Published.
Page generated: Fri Jul 19 13:01:44 2024

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