Calcium in PDB 9j34: Cryo-Em Structure of Arabidopsis CNGC1

The binding sites of Calcium atom in the Cryo-Em Structure of Arabidopsis CNGC1 (pdb code 9j34). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 3 binding sites of Calcium where determined in the Cryo-Em Structure of Arabidopsis CNGC1, PDB code: 9j34:
Jump to Calcium binding site number: 1; 2; 3;

Calcium binding site 1 out of 3 in the Cryo-Em Structure of Arabidopsis CNGC1


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryo-Em Structure of Arabidopsis CNGC1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1001 b:52.1 occ:1.00 OE1 A:GLN371 2.8 29.3 1.0 OE1 B:GLN371 3.0 29.1 1.0 OE1 D:GLN371 3.1 27.7 1.0 OE1 C:GLN371 3.3 27.8 1.0 OD1 D:ASN372 3.3 27.7 1.0 OD1 B:ASN372 3.4 29.2 1.0 OD1 A:ASN372 3.5 29.4 1.0 OD1 C:ASN372 3.5 28.2 1.0 CD A:GLN371 4.0 29.3 1.0 CG D:ASN372 4.2 27.7 1.0 CD B:GLN371 4.2 29.1 1.0 CG B:ASN372 4.3 29.2 1.0 CD D:GLN371 4.3 27.7 1.0 ND2 D:ASN372 4.3 27.7 1.0 ND2 B:ASN372 4.3 29.2 1.0 CG C:ASN372 4.4 28.2 1.0 CG A:ASN372 4.4 29.4 1.0 ND2 C:ASN372 4.4 28.2 1.0 CD C:GLN371 4.4 27.8 1.0 ND2 A:ASN372 4.5 29.4 1.0 O D:HOH1001 4.7 25.9 1.0 O A:HOH1101 4.7 28.1 1.0 O B:HOH1001 4.7 27.3 1.0 O C:HOH1001 4.7 26.1 1.0 CB A:GLN371 4.7 29.3 1.0 NE2 A:GLN371 4.8 29.3 1.0 CB B:GLN371 4.9 29.1 1.0 CB D:GLN371 4.9 27.7 1.0 CG A:GLN371 4.9 29.3 1.0

Calcium binding site 2 out of 3 in the Cryo-Em Structure of Arabidopsis CNGC1


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Cryo-Em Structure of Arabidopsis CNGC1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1002 b:67.7 occ:1.00 NE2 D:GLN371 2.7 27.7 1.0 NE2 B:GLN371 2.7 29.1 1.0 NE2 A:GLN371 2.7 29.3 1.0 NE2 C:GLN371 2.8 27.8 1.0 O B:HOH1002 3.3 38.8 1.0 O C:HOH1002 3.4 39.5 1.0 O A:HOH1102 3.4 40.6 1.0 O D:HOH1002 3.4 41.7 1.0 CD D:GLN371 3.7 27.7 1.0 CD B:GLN371 3.7 29.1 1.0 CD A:GLN371 3.7 29.3 1.0 CD C:GLN371 3.8 27.8 1.0 OE1 D:GLN371 3.8 27.7 1.0 OE1 B:GLN371 3.9 29.1 1.0 OE1 C:GLN371 3.9 27.8 1.0 OE1 A:GLN371 4.0 29.3 1.0 CA A:CA1003 4.4 74.8 1.0

Calcium binding site 3 out of 3 in the Cryo-Em Structure of Arabidopsis CNGC1


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Cryo-Em Structure of Arabidopsis CNGC1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1003 b:74.8 occ:1.00 O D:HOH1002 3.6 41.7 1.0 O A:HOH1102 3.6 40.6 1.0 O B:HOH1002 3.6 38.8 1.0 O C:HOH1002 3.6 39.5 1.0 CE2 A:PHE396 4.3 34.8 1.0 CE2 C:PHE396 4.3 35.9 1.0 CE2 B:PHE396 4.4 35.1 1.0 CE2 D:PHE396 4.4 36.1 1.0 CA A:CA1002 4.4 67.7 1.0 CZ B:PHE396 4.5 35.1 1.0 CZ D:PHE396 4.6 36.1 1.0 CZ C:PHE396 4.6 35.9 1.0 CZ A:PHE396 4.7 34.8 1.0

J.P.Wang, P.Zhang. Cryo-Em Structures of Arabidopsis CNGC1 To Be Published.