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Calcium in PDB 9m0i: Structure of the Intermediate of Lactoperoxidase Formed with Thiocynate and Hydrogen Peroxidase at 1.99 A Resolution.

Enzymatic activity of Structure of the Intermediate of Lactoperoxidase Formed with Thiocynate and Hydrogen Peroxidase at 1.99 A Resolution.

All present enzymatic activity of Structure of the Intermediate of Lactoperoxidase Formed with Thiocynate and Hydrogen Peroxidase at 1.99 A Resolution.:
1.11.1.7;

Protein crystallography data

The structure of Structure of the Intermediate of Lactoperoxidase Formed with Thiocynate and Hydrogen Peroxidase at 1.99 A Resolution., PDB code: 9m0i was solved by V.Viswanathan, A.Maurya, H.V.Sirohi, G.S.Kushwaha, M.Sinha, P.Kaur, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.11 / 2.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 54.27, 80.441, 76.599, 90, 103.2, 90
R / Rfree (%) 21 / 26.5

Other elements in 9m0i:

The structure of Structure of the Intermediate of Lactoperoxidase Formed with Thiocynate and Hydrogen Peroxidase at 1.99 A Resolution. also contains other interesting chemical elements:

Iodine (I) 20 atoms
Iron (Fe) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of the Intermediate of Lactoperoxidase Formed with Thiocynate and Hydrogen Peroxidase at 1.99 A Resolution. (pdb code 9m0i). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of the Intermediate of Lactoperoxidase Formed with Thiocynate and Hydrogen Peroxidase at 1.99 A Resolution., PDB code: 9m0i:

Calcium binding site 1 out of 1 in 9m0i

Go back to Calcium Binding Sites List in 9m0i
Calcium binding site 1 out of 1 in the Structure of the Intermediate of Lactoperoxidase Formed with Thiocynate and Hydrogen Peroxidase at 1.99 A Resolution.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of the Intermediate of Lactoperoxidase Formed with Thiocynate and Hydrogen Peroxidase at 1.99 A Resolution. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca602

b:36.0
occ:1.00
 O A:ASP110 2.4 34.8 1.0
O A:PHE186 2.4 36.5 1.0
O A:THR184 2.4 35.4 1.0
OD1 A:ASP110 2.4 41.1 1.0
OG A:SER190 2.4 39.2 1.0
OD1 A:ASP188 2.4 41.8 1.0
OG1 A:THR184 2.4 43.3 1.0
CG A:ASP188 3.3 39.1 1.0
C A:THR184 3.3 41.7 1.0
C A:ASP110 3.4 34.7 1.0
CB A:SER190 3.5 38.8 1.0
CG A:ASP110 3.6 43.0 1.0
C A:PHE186 3.6 38.4 1.0
OD2 A:ASP188 3.7 44.1 1.0
CB A:THR184 3.7 40.6 1.0
CA A:THR184 3.9 41.0 1.0
N A:THR184 4.0 40.3 1.0
CA A:ASP110 4.1 33.1 1.0
N A:PHE186 4.2 38.3 1.0
N A:ASP188 4.2 35.7 1.0
CB A:ASP110 4.3 38.4 1.0
N A:SER190 4.3 40.2 1.0
N A:LEU111 4.4 36.3 1.0
N A:SER185 4.4 35.3 1.0
CB A:ASP188 4.4 36.6 1.0
CA A:PHE186 4.5 39.5 1.0
CA A:LEU111 4.5 34.6 1.0
C A:SER185 4.5 40.6 1.0
CA A:SER190 4.5 38.2 1.0
OD2 A:ASP110 4.5 53.7 1.0
N A:LEU187 4.6 33.9 1.0
O A:HOH834 4.6 31.3 1.0
CA A:LEU187 4.7 37.1 1.0
CA A:ASP188 4.8 33.9 1.0
CD2 A:LEU111 4.8 32.1 1.0
CG2 A:THR184 4.8 37.6 1.0
CA A:SER185 4.9 38.5 1.0
C A:LEU187 5.0 36.8 1.0

Reference:

V.Viswanathan, A.Maurya, H.V.Sirohi, G.S.Kushwaha, M.Sinha, P.Kaur, S.Sharma, T.P.Singh. Structure of the Intermediate of Lactoperoxidase Formed with Thiocynate and Hydrogen Peroxidase at 1.99 A Resolution. To Be Published.
Page generated: Thu Jul 10 10:14:52 2025

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