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Calcium in PDB, part 340 (files: 13561-13600), PDB 7yvs-7zgm

Experimental structures of coordination spheres of Calcium (Ca) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Calcium atoms. PDB files: 13561-13600 (PDB 7yvs-7zgm).
  1. 7yvs (Ca: 21) - Complex Structure of Clostridioides Difficile Binary Toxin Unfolded Cdta-Bound Cdtb-Pore (Short).
  2. 7ywv (Ca: 5) - Eugenol Oxidase From Rhodococcus Jostii: Mutant S81H, D151E, A423M, H434Y, S394V, Q425S, I445D, S518P
  3. 7yyg (Ca: 1) - Crystal Structure of Gatekeeper of Type III Secretion System in Bordetella Bopn
    Other atoms: Na (1); Cl (1);
  4. 7yyy (Ca: 1) - Molecular Snapshots of Drug Release From Tubulin: 1 Microsecond After Photoactivation
    Other atoms: Mg (1);
  5. 7yyz (Ca: 1) - Molecular Snapshots of Drug Release From Tubulin: 10 Microseconds After Photoactivation.
    Other atoms: Mg (1);
  6. 7yz0 (Ca: 1) - Molecular Snapshots of Drug Release From Tubulin: 100 Microseconds After Photoactivation.
    Other atoms: Mg (1);
  7. 7yz1 (Ca: 1) - Molecular Snapshots of Drug Release From Tubulin: 1 Millisecond After Photoactivation.
    Other atoms: Mg (1);
  8. 7yz3 (Ca: 1) - Molecular Snapshots of Drug Release From Tubulin: Apo State
    Other atoms: Mg (1);
  9. 7yz5 (Ca: 1) - Molecular Snapshots of Drug Release From Tubulin: 100 Milliseconds (Steady State)
    Other atoms: Mg (1);
  10. 7yz6 (Ca: 1) - Molecular Snapshots of Drug Release From Tubulin: Dark (Steady State)
    Other atoms: Mg (2);
  11. 7yzx (Ca: 1) - Scpa From Streptococcus Pyogenes, D783A Mutant.
    Other atoms: Na (1);
  12. 7z01 (Ca: 1) - Z-SBTUBA4 Photoswitch Bound to Tubulin-Darpin D1 Complex
    Other atoms: Mg (1);
  13. 7z1i (Ca: 2) - Plant Myrosinase TGG1 From Arabidopsis Thaliana
  14. 7z25 (Ca: 1) - Trypsin (Bovine) Complexed with Compound 12
    Other atoms: Br (1); F (1);
  15. 7z2i (Ca: 1) - Trypsin (Bovine) Complexed with Compound 4
    Other atoms: F (3);
  16. 7z2n (Ca: 4) - Tubulin-18-Complex
    Other atoms: Mg (5);
  17. 7z2u (Ca: 2) - Wild-Type Ferulic Acid Esterase From Lactobacillus Buchneri in Complex with Ferulate
  18. 7z2v (Ca: 5) - Ferulic Acid Esterase Variant S114A From Lactobacillus Buchneri
  19. 7z3j (Ca: 2) - Structure of Crystallisable Rat Phospholipase C Gamma 1 in Complex with Inositol 1,4,5-Trisphosphate
  20. 7z3p (Ca: 1) - Crystal Structure of the Mouse Leptin:Lepr-CRH2 Encounter Complex to 1.95 A Resolution.
  21. 7z53 (Ca: 8) - Structure of Native Leukocyte Myeloperoxidase in Complex with A Truncated Version (Spin Truncated) of the Staphyloccal Peroxidase Inhibitor Spin From Staphylococcus Aureus
    Other atoms: Fe (8); Cl (8);
  22. 7z5u (Ca: 1) - Crystal Structure of the Peptidase Domain of Collagenase G From Clostridium Histolyticum in Complex with A Hydroxamate-Based Inhibitor
    Other atoms: Zn (1);
  23. 7z68 (Ca: 1) - Pseudomonas Aeruginosa Elastase in Complex with A Thiol Based Inhibitor (R-and S-Configured)
    Other atoms: Zn (1);
  24. 7z6q (Ca: 2) - Cryo-Em Structure of the Whole Photosynthetic Complex From the Green Sulfur Bacteria
    Other atoms: Mg (78); Fe (12);
  25. 7z6z (Ca: 3) - Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Fosinoprilat
    Other atoms: Cl (2); Zn (2); Na (1);
  26. 7z7d (Ca: 4) - Tubulin-Todalam-Vinblastine-Complex
    Other atoms: F (3); Mg (5);
  27. 7z7r (Ca: 1) - Complex I From E. Coli, Lmng-Purified, Apo, Open-Ready State
    Other atoms: Fe (32);
  28. 7z7s (Ca: 1) - Complex I From E. Coli, Lmng-Purified, Under Turnover at pH 6, Closed State
    Other atoms: Fe (32);
  29. 7z7t (Ca: 1) - Complex I From E. Coli, Lmng-Purified, Under Turnover at pH 6, Open State
    Other atoms: Fe (32);
  30. 7z7v (Ca: 1) - Complex I From E. Coli, Lmng-Purified, Under Turnover at pH 6, Open- Ready State
    Other atoms: Fe (32);
  31. 7z80 (Ca: 1) - Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Closed State
    Other atoms: Fe (32);
  32. 7z83 (Ca: 1) - Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open State
    Other atoms: Fe (32);
  33. 7z84 (Ca: 1) - Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State
    Other atoms: Fe (32);
  34. 7z8n (Ca: 3) - Gacs Histidine Kinase From Pseudomonas Aeruginosa
  35. 7z9f (Ca: 2) - Human Anionic Trypsin After Autoproteolysis at ARG122
  36. 7zbv (Ca: 1) - Crystal Structure of the Peptidase Domain of Collagenase G From Clostridium Histolyticum in Complex with A Diphosphonate-Based Inhibitor
    Other atoms: Zn (1); Cl (4);
  37. 7zc5 (Ca: 1) - Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Resting State
    Other atoms: Fe (32);
  38. 7zci (Ca: 1) - Complex I From E. Coli, Lmng-Purified, Under Turnover at pH 6, Resting State
    Other atoms: Fe (32);
  39. 7zei (Ca: 6) - Thermostable GH159 Glycoside Hydrolase From Caldicellulosiruptor at 1.7 A
    Other atoms: Mg (6);
  40. 7zgm (Ca: 1) - Plant N-Glycan Specific Alpha-1,3-Mannosidase
    Other atoms: Na (13); K (3);
Page generated: Mon Dec 15 09:33:21 2025

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