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Calcium in PDB 1ff1: Structure of the Second EPS15 Homology Domain of Human EPS15 in Complex with Ptgssstnpfl

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of the Second EPS15 Homology Domain of Human EPS15 in Complex with Ptgssstnpfl (pdb code 1ff1). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of the Second EPS15 Homology Domain of Human EPS15 in Complex with Ptgssstnpfl, PDB code: 1ff1:

Calcium binding site 1 out of 1 in 1ff1

Go back to Calcium Binding Sites List in 1ff1
Calcium binding site 1 out of 1 in the Structure of the Second EPS15 Homology Domain of Human EPS15 in Complex with Ptgssstnpfl


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of the Second EPS15 Homology Domain of Human EPS15 in Complex with Ptgssstnpfl within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca113

b:0.0
occ:1.00
HB2 A:ASP60 2.3 0.0 1.0
OE2 A:GLU69 2.5 0.0 1.0
H A:ASP60 2.6 0.0 1.0
OD1 A:ASP62 2.7 0.0 1.0
O A:MET64 2.8 0.0 1.0
OD2 A:ASP60 2.8 0.0 1.0
OD1 A:ASP58 2.8 0.0 1.0
OE1 A:GLU69 2.8 0.0 1.0
CD A:GLU69 2.9 0.0 1.0
CB A:ASP60 3.1 0.0 1.0
CG A:ASP60 3.2 0.0 1.0
H A:ASP62 3.3 0.0 1.0
H A:HIS61 3.3 0.0 1.0
CG A:ASP62 3.4 0.0 1.0
N A:ASP60 3.4 0.0 1.0
OD2 A:ASP62 3.5 0.0 1.0
HB2 A:MET64 3.6 0.0 1.0
C A:MET64 3.6 0.0 1.0
HA A:ASP58 3.6 0.0 1.0
HA A:LEU65 3.7 0.0 1.0
CA A:ASP60 3.7 0.0 1.0
H A:MET64 3.7 0.0 1.0
N A:HIS61 3.8 0.0 1.0
HD23 A:LEU65 3.8 0.0 1.0
H A:ASP66 3.9 0.0 1.0
HB3 A:ASP60 3.9 0.0 1.0
CG A:ASP58 4.0 0.0 1.0
H A:ILE59 4.0 0.0 1.0
C A:ASP60 4.1 0.0 1.0
N A:ASP62 4.2 0.0 1.0
OD1 A:ASP60 4.2 0.0 1.0
CB A:MET64 4.2 0.0 1.0
N A:ILE59 4.2 0.0 1.0
HD1 A:PHE30 4.2 0.0 1.0
CG A:GLU69 4.3 0.0 1.0
CA A:MET64 4.3 0.0 1.0
HB3 A:MET64 4.3 0.0 1.0
HB3 A:GLU69 4.3 0.0 1.0
N A:LEU65 4.3 0.0 1.0
HE1 A:PHE30 4.4 0.0 1.0
N A:MET64 4.4 0.0 1.0
CA A:ASP58 4.4 0.0 1.0
C A:ASP58 4.4 0.0 1.0
CA A:LEU65 4.5 0.0 1.0
HB A:ILE59 4.5 0.0 1.0
C A:ILE59 4.6 0.0 1.0
HG2 A:GLU69 4.6 0.0 1.0
CB A:GLU69 4.7 0.0 1.0
HB2 A:GLU69 4.7 0.0 1.0
HA A:ASP60 4.7 0.0 1.0
CB A:ASP62 4.8 0.0 1.0
N A:ASP66 4.8 0.0 1.0
OD2 A:ASP58 4.8 0.0 1.0
CA A:HIS61 4.8 0.0 1.0
CB A:ASP58 4.8 0.0 1.0
HA A:HIS61 4.9 0.0 1.0
CD2 A:LEU65 4.9 0.0 1.0
OD2 A:ASP66 5.0 0.0 1.0
CA A:ILE59 5.0 0.0 1.0

Reference:

T.De Beer, A.N.Hoofnagle, J.L.Enmon, R.C.Bowers, M.Yamabhai, B.K.Kay, M.Overduin. Molecular Mechanism of Npf Recognition By Eh Domains. Nat.Struct.Biol. V. 7 1018 2000.
ISSN: ISSN 1072-8368
PubMed: 11062555
DOI: 10.1038/80924
Page generated: Mon Jul 7 14:50:02 2025

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