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Calcium in PDB 1hj9: Atomic Resolution Structures of Trypsin Provide Insight Into Structural Radiation Damage

Enzymatic activity of Atomic Resolution Structures of Trypsin Provide Insight Into Structural Radiation Damage

All present enzymatic activity of Atomic Resolution Structures of Trypsin Provide Insight Into Structural Radiation Damage:
3.4.21.4;

Protein crystallography data

The structure of Atomic Resolution Structures of Trypsin Provide Insight Into Structural Radiation Damage, PDB code: 1hj9 was solved by H.-K.S.Leiros, S.M.Mcsweeney, A.O.Smalas, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8 / 0.95
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.055, 56.812, 66.282, 90.00, 90.00, 90.00
R / Rfree (%) 11.71 / 13.99

Calcium Binding Sites:

The binding sites of Calcium atom in the Atomic Resolution Structures of Trypsin Provide Insight Into Structural Radiation Damage (pdb code 1hj9). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Atomic Resolution Structures of Trypsin Provide Insight Into Structural Radiation Damage, PDB code: 1hj9:

Calcium binding site 1 out of 1 in 1hj9

Go back to Calcium Binding Sites List in 1hj9
Calcium binding site 1 out of 1 in the Atomic Resolution Structures of Trypsin Provide Insight Into Structural Radiation Damage


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Atomic Resolution Structures of Trypsin Provide Insight Into Structural Radiation Damage within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1001

b:8.8
occ:1.00
 OE1 A:GLU70 2.3 9.3 1.0
O A:VAL75 2.3 9.3 1.0
O A:ASN72 2.3 9.1 1.0
OE2 A:GLU80 2.3 9.2 1.0
O A:HOH2077 2.3 10.4 1.0
O A:HOH2089 2.4 9.3 1.0
HA A:VAL76 3.3 13.5 1.0
CD A:GLU70 3.3 8.1 1.0
CD A:GLU80 3.4 9.3 1.0
HG2 A:GLU80 3.4 13.7 1.0
C A:VAL75 3.4 8.4 1.0
H A:GLU77 3.5 14.5 1.0
C A:ASN72 3.5 8.9 1.0
HA A:ILE73 3.6 11.8 1.0
HG3 A:GLU77 3.7 15.8 1.0
H A:VAL75 3.7 10.2 1.0
HG3 A:GLU80 3.8 13.7 1.0
OE2 A:GLU70 3.8 9.5 1.0
CG A:GLU80 3.8 11.4 1.0
H A:ASP71 3.8 10.4 1.0
HA A:GLU70 3.9 9.5 1.0
CA A:VAL76 4.1 11.3 1.0
HB3 A:ASN72 4.1 12.7 1.0
N A:GLU77 4.1 12.1 1.0
N A:VAL76 4.2 10.2 1.0
HB2 A:GLU77 4.2 15.2 1.0
H A:ASN72 4.3 11.1 1.0
OE1 A:GLU77 4.3 11.7 1.0
CA A:ILE73 4.3 9.8 1.0
N A:VAL75 4.3 8.5 1.0
N A:ILE73 4.3 9.5 1.0
N A:ASN72 4.4 9.3 1.0
CA A:ASN72 4.4 9.1 1.0
O A:HOH2075 4.4 12.1 1.0
CG A:GLU77 4.4 13.1 1.0
CA A:VAL75 4.5 8.7 1.0
OE1 A:GLU80 4.5 10.2 1.0
C A:ILE73 4.5 9.7 1.0
O A:HOH2084 4.5 15.0 1.0
HB3 A:GLU70 4.5 9.5 1.0
N A:ASP71 4.5 8.6 1.0
C A:VAL76 4.6 13.0 1.0
CG A:GLU70 4.6 7.9 1.0
HB A:VAL75 4.7 11.6 1.0
CA A:GLU70 4.7 8.0 1.0
CD A:GLU77 4.7 13.4 1.0
CB A:GLU77 4.7 12.7 1.0
CB A:ASN72 4.8 10.6 1.0
CB A:GLU70 4.8 7.9 1.0
O A:ILE73 4.8 10.4 1.0
N A:ASN74 4.9 8.8 1.0
HG23 A:VAL76 4.9 25.4 1.0
H A:ASN74 4.9 10.6 1.0
H A:VAL76 5.0 12.2 1.0
C A:ASP71 5.0 9.0 1.0

Reference:

H.-K.S.Leiros, S.M.Mcsweeney, A.O.Smalas. Atomic Resolution Structure of Trypsin Provide Insight Into Structural Radiation Damage Acta Crystallogr.,Sect.D V. 57 488 2001.
ISSN: ISSN 0907-4449
PubMed: 11264577
DOI: 10.1107/S0907444901000646
Page generated: Mon Jul 7 15:37:40 2025

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