Calcium in PDB 1lem: The Monosaccharide Binding Site of Lentil Lectin: An X-Ray and Molecular Modelling Study

The structure of The Monosaccharide Binding Site of Lentil Lectin: An X-Ray and Molecular Modelling Study, PDB code: 1lem was solved by R.Loris, L.Wyns, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	N/A / 3.00
Space group	P 65 2 2
Cell size a, b, c (Å), α, β, γ (°)	85.710, 85.710, 165.380, 90.00, 90.00, 120.00
R / Rfree (%)	20.6 / n/a

The structure of The Monosaccharide Binding Site of Lentil Lectin: An X-Ray and Molecular Modelling Study also contains other interesting chemical elements:

Manganese

(Mn)

1 atom

The binding sites of Calcium atom in the The Monosaccharide Binding Site of Lentil Lectin: An X-Ray and Molecular Modelling Study (pdb code 1lem). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the The Monosaccharide Binding Site of Lentil Lectin: An X-Ray and Molecular Modelling Study, PDB code: 1lem:

Calcium binding site 1 out of 1 in the The Monosaccharide Binding Site of Lentil Lectin: An X-Ray and Molecular Modelling Study


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Monosaccharide Binding Site of Lentil Lectin: An X-Ray and Molecular Modelling Study within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca249 b:35.0 occ:1.00 OD1 A:ASN125 2.1 51.3 1.0 OD2 A:ASP121 2.4 31.8 1.0 OD2 A:ASP129 2.5 51.2 1.0 O A:PHE123 2.6 53.3 1.0 OD1 A:ASP121 2.7 33.9 1.0 CG A:ASP121 2.9 34.7 1.0 CG A:ASN125 3.2 51.8 1.0 CG A:ASP129 3.5 52.8 1.0 O A:GLY99 3.7 39.4 1.0 OD1 A:ASP129 3.7 57.5 1.0 C A:PHE123 3.8 53.4 1.0 CB A:ASN125 4.0 54.1 1.0 NE1 A:TRP128 4.0 50.2 1.0 CA A:GLY99 4.2 39.8 1.0 N A:ASN125 4.3 57.1 1.0 MN A:MN250 4.3 42.7 1.0 ND2 A:ASN125 4.4 52.9 1.0 CB A:ASP121 4.4 32.3 1.0 C A:GLY99 4.4 40.1 1.0 O A:ASP81 4.6 41.5 1.0 CA A:PHE123 4.7 49.9 1.0 N A:PHE123 4.8 47.6 1.0 CE2 A:TRP128 4.8 48.5 1.0 CA A:ASN125 4.8 55.1 1.0 N A:TYR124 4.8 55.3 1.0 CB A:PHE123 4.8 47.3 1.0 CZ2 A:TRP128 4.8 45.9 1.0 CD2 A:PHE123 4.9 51.4 1.0 C A:TYR124 4.9 58.0 1.0 CD1 A:TRP128 4.9 49.8 1.0 CB A:ASP129 4.9 52.2 1.0 CA A:TYR124 4.9 58.2 1.0 OD1 A:ASP81 5.0 18.5 1.0

R.Loris, F.Casset, J.Bouckaert, J.Pletinckx, M.H.Dao-Thi, F.Poortmans, A.Imberty, S.Perez, L.Wyns. The Monosaccharide Binding Site of Lentil Lectin: An X-Ray and Molecular Modelling Study. Glycoconj.J. V. 11 507 1994.
PubMed: 7696853
DOI: 10.1007/BF00731301