Calcium in PDB 1mvq: Cratylia Mollis Lectin (Isoform 1) in Complex with Methyl-Alpha-D- Mannose

The structure of Cratylia Mollis Lectin (Isoform 1) in Complex with Methyl-Alpha-D- Mannose, PDB code: 1mvq was solved by G.A.De Souza, P.S.Oliveira, S.Trapani, M.T.Correia, G.Oliva, L.C.Coelho, L.J.Greene, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	9.94 / 1.77
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	63.449, 77.956, 105.323, 90.00, 90.00, 90.00
R / Rfree (%)	14 / 17

The structure of Cratylia Mollis Lectin (Isoform 1) in Complex with Methyl-Alpha-D- Mannose also contains other interesting chemical elements:

Manganese

(Mn)

1 atom

The binding sites of Calcium atom in the Cratylia Mollis Lectin (Isoform 1) in Complex with Methyl-Alpha-D- Mannose (pdb code 1mvq). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Cratylia Mollis Lectin (Isoform 1) in Complex with Methyl-Alpha-D- Mannose, PDB code: 1mvq:

Calcium binding site 1 out of 1 in the Cratylia Mollis Lectin (Isoform 1) in Complex with Methyl-Alpha-D- Mannose


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cratylia Mollis Lectin (Isoform 1) in Complex with Methyl-Alpha-D- Mannose within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca238 b:14.8 occ:1.00 O A:TYR12 2.3 15.3 1.0 OD1 A:ASN14 2.4 16.3 1.0 OD2 A:ASP19 2.4 14.6 1.0 O A:HOH242 2.4 16.1 1.0 OD1 A:ASP10 2.4 15.5 1.0 O A:HOH243 2.5 18.4 1.0 OD2 A:ASP10 2.5 12.4 1.0 CG A:ASP10 2.9 13.4 1.0 CG A:ASP19 3.5 20.0 1.0 C A:TYR12 3.5 16.8 1.0 CG A:ASN14 3.6 17.6 1.0 N A:ASN14 3.9 19.0 1.0 OD1 A:ASP19 3.9 14.9 1.0 CB A:ASN14 4.2 19.7 1.0 MN A:MN239 4.2 13.9 1.0 CB A:ASP10 4.3 13.1 1.0 O A:HOH241 4.4 17.0 1.0 CA A:TYR12 4.4 16.3 1.0 N A:TYR12 4.4 14.8 1.0 N A:PRO13 4.4 17.9 1.0 CA A:PRO13 4.4 19.1 1.0 C A:PRO13 4.5 19.2 1.0 CB A:TYR12 4.6 15.6 1.0 CE1 A:HIS24 4.6 16.3 1.0 ND2 A:ASN14 4.7 16.5 1.0 CA A:ASN14 4.7 20.4 1.0 O A:ASP207 4.7 15.2 1.0 CB A:ASP19 4.7 20.6 1.0 OD1 A:ASP207 4.7 17.4 1.0 CB A:ARG227 4.8 15.8 1.0 O A:ARG227 4.8 15.6 1.0 CD2 A:TYR12 4.9 15.5 1.0 CA A:ARG227 4.9 15.4 1.0 NE2 A:HIS24 5.0 15.6 1.0

G.A.De Souza, P.S.Oliveira, S.Trapani, A.C.Santos, J.C.Rosa, H.J.Laure, M.T.Correia, G.A.Tavares, G.Oliva, L.C.Coelho, L.J.Greene. Amino Acid Sequence and Tertiary Structure of Cratylia Mollis Seed Lectin Glycobiology V. 13 961 2003.
ISSN: ISSN 0959-6658
PubMed: 12966038
DOI: 10.1093/GLYCOB/CWG115