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Calcium in PDB 1n2l: Crystal Structure of A Covalent Intermediate of Endogenous Human Arylsulfatase A

Enzymatic activity of Crystal Structure of A Covalent Intermediate of Endogenous Human Arylsulfatase A

All present enzymatic activity of Crystal Structure of A Covalent Intermediate of Endogenous Human Arylsulfatase A:
3.1.6.8;

Protein crystallography data

The structure of Crystal Structure of A Covalent Intermediate of Endogenous Human Arylsulfatase A, PDB code: 1n2l was solved by M.Chruszcz, P.Laidler, M.Monkiewicz, E.Ortlund, L.Lebioda, K.Lewinski, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 3.20
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 131.250, 131.250, 191.840, 90.00, 90.00, 90.00
R / Rfree (%) 18.2 / 22.3

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of A Covalent Intermediate of Endogenous Human Arylsulfatase A (pdb code 1n2l). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of A Covalent Intermediate of Endogenous Human Arylsulfatase A, PDB code: 1n2l:

Calcium binding site 1 out of 1 in 1n2l

Go back to Calcium Binding Sites List in 1n2l
Calcium binding site 1 out of 1 in the Crystal Structure of A Covalent Intermediate of Endogenous Human Arylsulfatase A


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of A Covalent Intermediate of Endogenous Human Arylsulfatase A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca600

b:32.5
occ:1.00
OD2 A:ASP281 2.3 32.2 1.0
OD1 A:ASN282 2.4 23.4 1.0
OG2 A:FGP69 2.5 41.9 1.0
OD1 A:ASP30 2.5 11.5 1.0
OD1 A:ASP29 2.6 11.3 1.0
OD1 A:ASP281 2.8 16.8 1.0
CG A:ASP281 2.8 27.9 1.0
O3P A:FGP69 3.1 46.5 1.0
CG A:ASN282 3.2 13.3 1.0
P A:FGP69 3.3 47.4 1.0
ND2 A:ASN282 3.5 16.6 1.0
CB A:FGP69 3.6 25.4 1.0
CG A:ASP30 3.7 12.2 1.0
CA A:FGP69 3.7 23.0 1.0
CG A:ASP29 3.8 13.1 1.0
N A:FGP69 3.8 18.3 1.0
N A:ASP30 3.8 11.3 1.0
O1P A:FGP69 4.1 45.5 1.0
OG1 A:FGP69 4.2 23.6 1.0
CB A:ASP281 4.2 23.6 1.0
NZ A:LYS123 4.4 2.0 1.0
CA A:ASP30 4.4 8.8 1.0
OD2 A:ASP30 4.5 8.3 1.0
CB A:ASN282 4.5 10.8 1.0
OD2 A:ASP29 4.6 21.0 1.0
C A:LEU68 4.6 15.2 1.0
N A:ASN282 4.6 14.3 1.0
CD2 A:HIS229 4.6 18.2 1.0
O2P A:FGP69 4.6 47.8 1.0
CB A:ASP30 4.6 7.0 1.0
C A:ASP29 4.6 17.1 1.0
CA A:ASP29 4.6 12.9 1.0
CE A:LYS302 4.7 41.2 1.0
NH2 A:ARG73 4.7 9.3 1.0
NZ A:LYS302 4.8 47.0 1.0
CB A:ASP29 4.9 18.4 1.0
C A:ASP281 4.9 15.7 1.0

Reference:

M.Chruszcz, P.Laidler, M.Monkiewicz, E.Ortlund, L.Lebioda, K.Lewinski. Crystal Structure of A Covalent Intermediate of Endogenous Human Arylsulfatase A. J.Inorg.Biochem. V. 96 386 2003.
ISSN: ISSN 0162-0134
PubMed: 12888274
DOI: 10.1016/S0162-0134(03)00176-4
Page generated: Thu Jul 11 12:41:16 2024

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