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Calcium in PDB 1rz3: Structure of A Possible Uridine Kinase From Bacillus Stearothermophilus

Protein crystallography data

The structure of Structure of A Possible Uridine Kinase From Bacillus Stearothermophilus, PDB code: 1rz3 was solved by M.E.Cuff, A.Joachimiak, R.-Y.Wu, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.45 / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 45.010, 45.185, 107.023, 90.00, 90.00, 90.00
R / Rfree (%) 20.3 / 23.8

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of A Possible Uridine Kinase From Bacillus Stearothermophilus (pdb code 1rz3). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of A Possible Uridine Kinase From Bacillus Stearothermophilus, PDB code: 1rz3:

Calcium binding site 1 out of 1 in 1rz3

Go back to Calcium Binding Sites List in 1rz3
Calcium binding site 1 out of 1 in the Structure of A Possible Uridine Kinase From Bacillus Stearothermophilus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of A Possible Uridine Kinase From Bacillus Stearothermophilus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca555

b:17.7
occ:1.00
OD1 A:ASP124 2.3 12.3 1.0
O A:HOH794 2.4 52.2 1.0
O A:ACT655 2.5 41.3 1.0
O A:HOH666 2.6 18.6 1.0
CH3 A:ACT655 2.6 42.6 1.0
C A:ACT655 2.9 44.2 1.0
O A:HOH670 2.9 42.6 1.0
O A:HOH871 3.2 67.2 1.0
CG A:ASP124 3.3 14.9 1.0
OD2 A:ASP124 3.7 14.3 1.0
OXT A:ACT655 4.0 46.5 1.0
O A:HOH782 4.2 56.3 1.0
CB A:ASP124 4.7 15.3 1.0
N A:ASP124 4.7 14.0 1.0
O A:HOH755 4.9 28.0 1.0
C A:ASP124 5.0 14.6 1.0

Reference:

M.E.Cuff, A.Joachimiak, R.-Y.Wu. Structure of Hypothetical Protein RBSTP0775 From Bacillus Stearothermophilus To Be Published.
Page generated: Thu Jul 11 22:19:41 2024

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