Atomistry » Calcium » PDB 1tu5-1ujc » 1uis
Atomistry »
  Calcium »
    PDB 1tu5-1ujc »
      1uis »

Calcium in PDB 1uis: The 2.0 Crystal Structure of EQFP611, A Far-Red Fluorescent Protein From the Sea Anemone Entacmaea Quadricolor

Protein crystallography data

The structure of The 2.0 Crystal Structure of EQFP611, A Far-Red Fluorescent Protein From the Sea Anemone Entacmaea Quadricolor, PDB code: 1uis was solved by J.Petersen, P.G.Wilmann, T.Beddoe, A.J.Oakley, R.J.Devenish, M.Prescott, J.Rossjohn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.00
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 77.935, 77.935, 327.472, 90.00, 90.00, 120.00
R / Rfree (%) 21.3 / 25.3

Calcium Binding Sites:

The binding sites of Calcium atom in the The 2.0 Crystal Structure of EQFP611, A Far-Red Fluorescent Protein From the Sea Anemone Entacmaea Quadricolor (pdb code 1uis). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the The 2.0 Crystal Structure of EQFP611, A Far-Red Fluorescent Protein From the Sea Anemone Entacmaea Quadricolor, PDB code: 1uis:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 1uis

Go back to Calcium Binding Sites List in 1uis
Calcium binding site 1 out of 2 in the The 2.0 Crystal Structure of EQFP611, A Far-Red Fluorescent Protein From the Sea Anemone Entacmaea Quadricolor


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The 2.0 Crystal Structure of EQFP611, A Far-Red Fluorescent Protein From the Sea Anemone Entacmaea Quadricolor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1004

b:44.4
occ:1.00
O A:HOH1031 2.8 41.0 1.0
OG1 A:THR40 3.0 31.7 1.0
CE1 A:HIS214 3.6 30.2 1.0
C A:GLN39 3.7 31.6 1.0
N A:THR40 3.8 31.4 1.0
CA A:GLN39 3.9 32.0 1.0
ND1 A:HIS214 3.9 30.1 1.0
N A:GLN39 3.9 32.4 1.0
CB A:THR40 4.0 32.9 1.0
O A:GLN39 4.2 29.8 1.0
O A:ASP31 4.3 37.3 1.0
C A:THR38 4.4 32.4 1.0
CB A:THR38 4.5 35.3 1.0
CA A:THR40 4.5 33.6 1.0
OG1 A:THR38 4.5 34.6 1.0
O A:THR38 4.7 29.8 1.0
CA A:GLY32 4.7 35.6 1.0
NE2 A:HIS214 4.8 31.7 1.0

Calcium binding site 2 out of 2 in 1uis

Go back to Calcium Binding Sites List in 1uis
Calcium binding site 2 out of 2 in the The 2.0 Crystal Structure of EQFP611, A Far-Red Fluorescent Protein From the Sea Anemone Entacmaea Quadricolor


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of The 2.0 Crystal Structure of EQFP611, A Far-Red Fluorescent Protein From the Sea Anemone Entacmaea Quadricolor within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca1003

b:53.1
occ:1.00
O B:GLU141 2.9 29.4 1.0
N B:ALA161 2.9 26.5 1.0
O B:PRO142 3.0 26.7 1.0
CA B:MET160 3.2 27.2 1.0
CE A:MET146 3.3 41.5 1.0
C B:GLU141 3.4 28.8 1.0
CB B:MET160 3.4 27.2 1.0
C B:MET160 3.5 27.1 1.0
CB B:GLU141 3.6 30.1 1.0
CB B:ASN143 3.7 26.1 1.0
C B:PRO142 3.7 28.2 1.0
CG B:MET160 3.8 29.2 1.0
O B:ALA161 3.8 28.3 1.0
CA B:GLU141 3.9 29.1 1.0
N B:GLU141 3.9 27.4 1.0
CA B:ALA161 3.9 28.2 1.0
CE B:MET160 4.1 26.5 1.0
CB B:ALA161 4.2 27.1 1.0
N B:PRO142 4.2 28.5 1.0
SD A:MET146 4.2 44.2 1.0
O B:GLN159 4.3 24.4 1.0
C B:ALA161 4.3 28.8 1.0
N B:ASN143 4.4 26.3 1.0
CA B:ASN143 4.4 27.2 1.0
CZ A:PHE192 4.5 29.4 1.0
N B:MET160 4.5 27.4 1.0
CA B:PRO142 4.5 27.2 1.0
CG B:ASN143 4.5 28.2 1.0
OD1 B:ASN143 4.7 28.0 1.0
O B:MET160 4.8 27.4 1.0
C B:GLN159 4.8 25.8 1.0
CG B:GLU141 4.8 31.4 1.0
SD B:MET160 4.9 28.1 1.0
CE3 B:TRP140 4.9 31.3 1.0
C B:TRP140 4.9 29.7 1.0

Reference:

J.Petersen, P.G.Wilmann, T.Beddoe, A.J.Oakley, R.J.Devenish, M.Prescott, J.Rossjohn. The 2.0A Crystal Structure of EQFP611, A Far-Red Fluorescent Protein From the Sea Anemone Entacmaea Quadricolor J.Biol.Chem. V. 278 44626 2003.
ISSN: ISSN 0021-9258
PubMed: 12909624
DOI: 10.1074/JBC.M307896200
Page generated: Tue Jul 8 02:34:28 2025

Last articles

Cl in 5QCH
Cl in 5QD5
Cl in 5QE6
Cl in 5QCN
Cl in 5QCM
Cl in 5QCG
Cl in 5QCL
Cl in 5QCK
Cl in 5QCE
Cl in 5QCI
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy