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Calcium in PDB 2cbl: N-Terminal Domain of Cbl in Complex with Its Binding Site on Zap-70

Protein crystallography data

The structure of N-Terminal Domain of Cbl in Complex with Its Binding Site on Zap-70, PDB code: 2cbl was solved by W.Meng, S.Sawasdikosol, S.J.Burakoff, M.J.Eck, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.10
Space group P 6
Cell size a, b, c (Å), α, β, γ (°) 123.380, 123.380, 56.390, 90.00, 90.00, 120.00
R / Rfree (%) 17.3 / 24.5

Calcium Binding Sites:

The binding sites of Calcium atom in the N-Terminal Domain of Cbl in Complex with Its Binding Site on Zap-70 (pdb code 2cbl). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the N-Terminal Domain of Cbl in Complex with Its Binding Site on Zap-70, PDB code: 2cbl:

Calcium binding site 1 out of 1 in 2cbl

Go back to Calcium Binding Sites List in 2cbl
Calcium binding site 1 out of 1 in the N-Terminal Domain of Cbl in Complex with Its Binding Site on Zap-70


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of N-Terminal Domain of Cbl in Complex with Its Binding Site on Zap-70 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca352

b:15.8
occ:1.00
OD1 A:ASN233 2.4 40.6 1.0
OD1 A:ASP229 2.4 40.2 1.0
O A:TYR235 2.4 48.4 1.0
OG1 A:THR231 2.4 41.5 1.0
OE2 A:GLU240 2.5 40.5 1.0
OE1 A:GLU240 2.5 39.4 1.0
O A:HOH634 2.6 38.5 1.0
CD A:GLU240 2.9 38.2 1.0
C A:TYR235 3.5 44.0 1.0
CG A:ASN233 3.5 38.1 1.0
CG A:ASP229 3.6 35.9 1.0
CB A:THR231 3.7 40.2 1.0
N A:THR231 4.1 37.5 1.0
OD2 A:ASP229 4.2 38.9 1.0
CG2 A:THR231 4.2 35.0 1.0
ND2 A:ASN233 4.2 38.5 1.0
N A:TYR235 4.2 48.4 1.0
N A:ASN233 4.2 41.1 1.0
CA A:TYR235 4.3 47.1 1.0
CA A:THR231 4.3 37.6 1.0
CG A:GLU240 4.3 36.6 1.0
OE2 A:GLU164 4.4 41.0 1.0
CB A:TYR235 4.5 51.7 1.0
N A:ILE236 4.5 39.3 1.0
C A:THR231 4.5 37.8 1.0
N A:CYS232 4.5 37.6 1.0
CA A:ASP229 4.5 36.5 1.0
O A:HOH633 4.6 45.4 1.0
C A:ASP229 4.6 37.1 1.0
CA A:ILE236 4.6 37.1 1.0
CB A:ASN233 4.6 38.5 1.0
CB A:ASP229 4.7 31.9 1.0
N A:SER237 4.7 36.7 1.0
N A:LEU230 4.8 36.4 1.0
CA A:ASN233 4.8 42.5 1.0

Reference:

W.Meng, S.Sawasdikosol, S.J.Burakoff, M.J.Eck. Structure of the Amino-Terminal Domain of Cbl Complexed to Its Binding Site on Zap-70 Kinase. Nature V. 398 84 1999.
ISSN: ISSN 0028-0836
PubMed: 10078535
DOI: 10.1038/18050
Page generated: Tue Jul 8 04:47:35 2025

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