Calcium in PDB 2jul: uc(Nmr) Structure of Dream

The binding sites of Calcium atom in the uc(Nmr) Structure of Dream (pdb code 2jul). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the uc(Nmr) Structure of Dream, PDB code: 2jul:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the uc(Nmr) Structure of Dream


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of uc(Nmr) Structure of Dream within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca501 b:0.0 occ:1.00 OD1 A:ASN177 2.5 0.0 1.0 OE2 A:GLU186 2.5 0.0 1.0 O A:CYS181 2.5 0.0 1.0 OD1 A:ASP175 2.5 0.0 1.0 OE1 A:GLU186 2.5 0.0 1.0 OD2 A:ASP179 2.6 0.0 1.0 CD A:GLU186 2.8 0.0 1.0 OD1 A:ASP179 2.9 0.0 1.0 CG A:ASP179 3.0 0.0 1.0 HD22 A:ASN177 3.1 0.0 1.0 CG A:ASN177 3.4 0.0 1.0 CG A:ASP175 3.6 0.0 1.0 H A:CYS181 3.7 0.0 1.0 ND2 A:ASN177 3.7 0.0 1.0 C A:CYS181 3.7 0.0 1.0 O A:LYS178 3.8 0.0 1.0 HA A:ILE182 3.8 0.0 1.0 OD2 A:ASP175 4.2 0.0 1.0 N A:CYS181 4.2 0.0 1.0 HG22 A:THR183 4.2 0.0 1.0 CG A:GLU186 4.3 0.0 1.0 CA A:CYS181 4.6 0.0 1.0 CB A:ASP179 4.6 0.0 1.0 HG2 A:GLU186 4.6 0.0 1.0 HD21 A:ASN177 4.6 0.0 1.0 N A:ILE182 4.6 0.0 1.0 HA A:ASP175 4.6 0.0 1.0 CA A:ILE182 4.7 0.0 1.0 HB2 A:CYS181 4.7 0.0 1.0 H A:ASN177 4.8 0.0 1.0 HG3 A:GLU186 4.8 0.0 1.0 CB A:ASN177 4.8 0.0 1.0 CB A:ASP175 4.8 0.0 1.0 HB2 A:ASP175 4.9 0.0 1.0 C A:ASP179 4.9 0.0 1.0 HA2 A:GLY180 4.9 0.0 1.0 HB3 A:ASP179 4.9 0.0 1.0 C A:LYS178 5.0 0.0 1.0

Calcium binding site 2 out of 2 in the uc(Nmr) Structure of Dream


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of uc(Nmr) Structure of Dream within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca502 b:0.0 occ:1.00 OD1 A:ASP223 2.5 0.0 1.0 OD1 A:ASP227 2.5 0.0 1.0 OD1 A:ASN225 2.5 0.0 1.0 OE1 A:GLU234 2.6 0.0 1.0 H A:ARG224 2.6 0.0 1.0 OE2 A:GLU234 2.7 0.0 1.0 HA A:ASP223 2.8 0.0 1.0 CG A:ASP223 2.8 0.0 1.0 O A:GLY228 2.8 0.0 1.0 O A:VAL229 2.8 0.0 1.0 CD A:GLU234 2.9 0.0 1.0 C A:GLY228 3.0 0.0 1.0 OD2 A:ASP223 3.1 0.0 1.0 C A:VAL229 3.1 0.0 1.0 HA A:VAL230 3.2 0.0 1.0 N A:VAL229 3.5 0.0 1.0 N A:ARG224 3.5 0.0 1.0 CG A:ASP227 3.5 0.0 1.0 CA A:ASP223 3.6 0.0 1.0 N A:VAL230 3.6 0.0 1.0 H A:GLY228 3.7 0.0 1.0 HA2 A:GLY228 3.7 0.0 1.0 CG A:ASN225 3.7 0.0 1.0 CA A:GLY228 3.7 0.0 1.0 N A:GLY228 3.7 0.0 1.0 CA A:VAL229 3.8 0.0 1.0 HD22 A:ASN225 3.8 0.0 1.0 CB A:ASP223 3.8 0.0 1.0 OD2 A:ASP227 3.9 0.0 1.0 CA A:VAL230 3.9 0.0 1.0 C A:ASP223 4.0 0.0 1.0 H A:VAL229 4.0 0.0 1.0 HA A:VAL229 4.0 0.0 1.0 O A:ASN225 4.1 0.0 1.0 H A:ASN225 4.1 0.0 1.0 ND2 A:ASN225 4.2 0.0 1.0 HB A:VAL230 4.2 0.0 1.0 H A:VAL230 4.2 0.0 1.0 N A:ASN225 4.3 0.0 1.0 HB2 A:ASP223 4.5 0.0 1.0 CG A:GLU234 4.5 0.0 1.0 C A:ASP227 4.5 0.0 1.0 HB3 A:ASP223 4.6 0.0 1.0 CB A:VAL230 4.6 0.0 1.0 HZ A:PHE219 4.6 0.0 1.0 C A:ARG224 4.6 0.0 1.0 CA A:ARG224 4.6 0.0 1.0 HG13 A:VAL230 4.7 0.0 1.0 HA3 A:GLY228 4.7 0.0 1.0 CB A:ASP227 4.8 0.0 1.0 C A:ASN225 4.8 0.0 1.0 N A:ASP223 4.8 0.0 1.0 HG2 A:GLU234 4.9 0.0 1.0 CB A:ASN225 4.9 0.0 1.0 CA A:ASN225 5.0 0.0 1.0 HB2 A:GLU234 5.0 0.0 1.0 HB3 A:GLU234 5.0 0.0 1.0 CZ A:PHE219 5.0 0.0 1.0

J.D.Lusin, M.Vanarotti, C.Li, A.Valiveti, J.B.Ames. uc(Nmr) Structure of Dream: Implications For Ca(2+)-Dependent Dna Binding and Protein Dimerization. Biochemistry V. 47 2252 2008.
ISSN: ISSN 0006-2960
PubMed: 18201103
DOI: 10.1021/BI7017267