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Calcium in PDB 2jzi: Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin

Enzymatic activity of Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin

All present enzymatic activity of Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin:
3.1.3.16;

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin (pdb code 2jzi). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin, PDB code: 2jzi:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in 2jzi

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Calcium binding site 1 out of 4 in the Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca149

b:0.0
occ:1.00
OD2 A:ASP24 2.6 0.0 1.0
OD1 A:ASP20 2.6 0.0 1.0
OD1 A:ASP24 2.6 0.0 1.0
OD2 A:ASP20 2.6 0.0 1.0
OD1 A:ASP22 2.7 0.0 1.0
OD2 A:ASP22 2.8 0.0 1.0
O A:THR26 2.8 0.0 1.0
CG A:ASP20 2.9 0.0 1.0
CG A:ASP24 2.9 0.0 1.0
CG A:ASP22 3.1 0.0 1.0
HG22 A:THR28 3.4 0.0 1.0
H A:ASP24 3.8 0.0 1.0
HA A:ILE27 3.8 0.0 1.0
C A:THR26 3.8 0.0 1.0
H A:THR28 3.9 0.0 1.0
OG1 A:THR26 3.9 0.0 1.0
HB A:THR28 3.9 0.0 1.0
H A:ASP22 4.0 0.0 1.0
HG1 A:THR26 4.1 0.0 1.0
HG21 A:THR62 4.2 0.0 1.0
N A:THR28 4.2 0.0 1.0
CB A:ASP20 4.3 0.0 1.0
CB A:ASP24 4.3 0.0 1.0
H A:THR26 4.3 0.0 1.0
HB2 A:ASP20 4.4 0.0 1.0
CG2 A:THR28 4.4 0.0 1.0
CA A:ILE27 4.5 0.0 1.0
C A:ILE27 4.5 0.0 1.0
HB3 A:ASP24 4.5 0.0 1.0
N A:ILE27 4.5 0.0 1.0
CB A:THR28 4.5 0.0 1.0
CB A:ASP22 4.6 0.0 1.0
N A:ASP24 4.7 0.0 1.0
HB3 A:ASP20 4.7 0.0 1.0
HG23 A:THR28 4.8 0.0 1.0
CA A:THR26 4.8 0.0 1.0
H A:GLY23 4.8 0.0 1.0
CA A:THR28 4.8 0.0 1.0
HB A:THR62 4.8 0.0 1.0
N A:ASP22 4.9 0.0 1.0
HA A:THR28 4.9 0.0 1.0
H A:LYS21 4.9 0.0 1.0
CB A:THR26 4.9 0.0 1.0
N A:THR26 5.0 0.0 1.0
HB2 A:ASP24 5.0 0.0 1.0
HB2 A:ASP22 5.0 0.0 1.0

Calcium binding site 2 out of 4 in 2jzi

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Calcium binding site 2 out of 4 in the Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca150

b:0.0
occ:1.00
OD1 A:ASN60 2.6 0.0 1.0
OD2 A:ASP56 2.6 0.0 1.0
OD2 A:ASP58 2.6 0.0 1.0
OD1 A:ASP56 2.6 0.0 1.0
OD1 A:ASP58 2.6 0.0 1.0
OD1 A:ASP64 2.8 0.0 1.0
CG A:ASP58 2.9 0.0 1.0
CG A:ASP56 3.0 0.0 1.0
HD22 A:ASN60 3.0 0.0 1.0
CG A:ASN60 3.0 0.0 1.0
OG1 A:THR62 3.1 0.0 1.0
HG1 A:THR62 3.1 0.0 1.0
ND2 A:ASN60 3.3 0.0 1.0
H A:ASN60 3.5 0.0 1.0
CG A:ASP64 3.6 0.0 1.0
H A:ASP58 3.7 0.0 1.0
OD2 A:ASP64 3.8 0.0 1.0
O A:THR62 4.0 0.0 1.0
HD21 A:ASN60 4.0 0.0 1.0
HB3 A:ASN60 4.1 0.0 1.0
CB A:ASN60 4.2 0.0 1.0
H A:THR62 4.2 0.0 1.0
H A:ALA57 4.3 0.0 1.0
H A:GLY59 4.3 0.0 1.0
C A:THR62 4.3 0.0 1.0
N A:ASN60 4.3 0.0 1.0
CB A:ASP58 4.4 0.0 1.0
CB A:THR62 4.4 0.0 1.0
CB A:ASP56 4.5 0.0 1.0
HG22 A:THR26 4.5 0.0 1.0
N A:ASP58 4.6 0.0 1.0
HG22 A:THR62 4.7 0.0 1.0
N A:GLY59 4.7 0.0 1.0
N A:ASP64 4.7 0.0 1.0
HB3 A:ASP58 4.7 0.0 1.0
CA A:THR62 4.8 0.0 1.0
H A:ASP64 4.8 0.0 1.0
CA A:ASN60 4.8 0.0 1.0
HA A:ILE63 4.8 0.0 1.0
HA A:ASP64 4.8 0.0 1.0
N A:ILE63 4.8 0.0 1.0
N A:THR62 4.8 0.0 1.0
C A:ILE63 4.8 0.0 1.0
HB2 A:ASP56 4.8 0.0 1.0
CB A:ASP64 4.9 0.0 1.0
CA A:ASP58 4.9 0.0 1.0
HB3 A:ASP56 4.9 0.0 1.0
HG1 A:THR26 5.0 0.0 1.0
N A:ALA57 5.0 0.0 1.0

Calcium binding site 3 out of 4 in 2jzi

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Calcium binding site 3 out of 4 in the Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca151

b:0.0
occ:1.00
HB2 A:ASN97 2.5 0.0 1.0
OD1 A:ASN97 2.6 0.0 1.0
OD2 A:ASP93 2.6 0.0 1.0
OD1 A:ASP93 2.6 0.0 1.0
OD1 A:ASP95 2.7 0.0 1.0
OD2 A:ASP95 2.8 0.0 1.0
CG A:ASP93 3.0 0.0 1.0
CG A:ASP95 3.0 0.0 1.0
H A:ASN97 3.3 0.0 1.0
CG A:ASN97 3.3 0.0 1.0
CB A:ASN97 3.4 0.0 1.0
H A:ASP95 3.5 0.0 1.0
O A:TYR99 3.8 0.0 1.0
HG3 A:GLU104 3.8 0.0 1.0
HB3 A:ASN97 4.1 0.0 1.0
N A:ASN97 4.1 0.0 1.0
H A:LYS94 4.2 0.0 1.0
H A:GLY96 4.3 0.0 1.0
CA A:ASN97 4.4 0.0 1.0
N A:ASP95 4.4 0.0 1.0
CB A:ASP95 4.4 0.0 1.0
CB A:ASP93 4.5 0.0 1.0
HB2 A:LYS94 4.6 0.0 1.0
ND2 A:ASN97 4.6 0.0 1.0
H A:TYR99 4.6 0.0 1.0
HB3 A:ASP95 4.8 0.0 1.0
N A:GLY96 4.8 0.0 1.0
N A:LYS94 4.8 0.0 1.0
CG A:GLU104 4.9 0.0 1.0
HB3 A:ASP93 4.9 0.0 1.0
CA A:ASP95 4.9 0.0 1.0
HB2 A:ASP93 5.0 0.0 1.0
C A:TYR99 5.0 0.0 1.0

Calcium binding site 4 out of 4 in 2jzi

Go back to Calcium Binding Sites List in 2jzi
Calcium binding site 4 out of 4 in the Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca152

b:0.0
occ:1.00
HB2 A:ASP131 2.5 0.0 1.0
HG3 A:GLN135 2.6 0.0 1.0
CG A:ASP131 2.6 0.0 1.0
OD1 A:ASP129 2.6 0.0 1.0
OD2 A:ASP133 2.6 0.0 1.0
OD2 A:ASP129 2.6 0.0 1.0
OD1 A:ASP133 2.7 0.0 1.0
OD1 A:ASP131 2.8 0.0 1.0
OE1 A:GLU140 2.8 0.0 1.0
O A:GLN135 2.8 0.0 1.0
OD2 A:ASP131 2.9 0.0 1.0
CG A:ASP133 2.9 0.0 1.0
CG A:ASP129 2.9 0.0 1.0
CB A:ASP131 3.1 0.0 1.0
CD A:GLU140 3.4 0.0 1.0
H A:ASP131 3.5 0.0 1.0
CG A:GLN135 3.6 0.0 1.0
OE2 A:GLU140 3.6 0.0 1.0
C A:GLN135 3.7 0.0 1.0
H A:GLN135 3.7 0.0 1.0
HB3 A:ASP131 3.8 0.0 1.0
HB2 A:GLN135 3.9 0.0 1.0
H A:ASP133 3.9 0.0 1.0
HG2 A:GLN135 3.9 0.0 1.0
CB A:GLN135 4.1 0.0 1.0
N A:ASP131 4.2 0.0 1.0
CA A:ASP131 4.2 0.0 1.0
HA A:VAL136 4.2 0.0 1.0
CB A:ASP133 4.2 0.0 1.0
CA A:GLN135 4.3 0.0 1.0
HB3 A:ASP133 4.3 0.0 1.0
HG2 A:GLU140 4.3 0.0 1.0
CB A:ASP129 4.3 0.0 1.0
N A:GLN135 4.4 0.0 1.0
HB2 A:ASP129 4.5 0.0 1.0
CG A:GLU140 4.5 0.0 1.0
H A:ASN137 4.5 0.0 1.0
H A:ILE130 4.5 0.0 1.0
HG12 A:ILE130 4.6 0.0 1.0
CD A:GLN135 4.6 0.0 1.0
N A:VAL136 4.7 0.0 1.0
HG13 A:ILE130 4.7 0.0 1.0
H A:GLY132 4.7 0.0 1.0
N A:ASP133 4.8 0.0 1.0
H A:GLY134 4.8 0.0 1.0
C A:ASP131 4.8 0.0 1.0
HB3 A:ASP129 4.9 0.0 1.0
HB2 A:ASP133 4.9 0.0 1.0
CA A:VAL136 5.0 0.0 1.0
N A:GLY132 5.0 0.0 1.0

Reference:

C.Chyan, J.Huang, D.Irene, T.Lin. Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin To Be Published.
Page generated: Fri Jul 12 13:52:36 2024

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