Calcium in PDB 2og9: Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme From Polaromonas Sp. JS666

All present enzymatic activity of Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme From Polaromonas Sp. JS666:
5.1.2.2;

The structure of Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme From Polaromonas Sp. JS666, PDB code: 2og9 was solved by D.Kumaran, S.K.Burley, S.Swaminathan, New York Sgx Research Center Forstructural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	23.84 / 1.90
Space group	I 4
Cell size a, b, c (Å), α, β, γ (°)	133.416, 133.416, 87.434, 90.00, 90.00, 90.00
R / Rfree (%)	20.3 / 23

The binding sites of Calcium atom in the Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme From Polaromonas Sp. JS666 (pdb code 2og9). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme From Polaromonas Sp. JS666, PDB code: 2og9:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme From Polaromonas Sp. JS666


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme From Polaromonas Sp. JS666 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca401 b:28.9 occ:1.00 O A:ALA254 2.3 23.7 1.0 O A:HOH405 2.3 29.2 1.0 O A:HOH404 2.4 26.4 1.0 O A:PHE257 2.4 22.7 1.0 O A:HOH403 2.4 27.1 1.0 O A:HOH402 2.5 21.4 1.0 O A:HOH567 2.5 25.4 1.0 C A:ALA254 3.5 23.4 1.0 C A:PHE257 3.6 25.0 1.0 CA A:ALA254 4.2 22.6 1.0 O A:ASP258 4.4 21.9 1.0 O A:HOH570 4.4 26.1 1.0 CA A:ASP258 4.4 25.6 1.0 N A:ASP258 4.4 24.5 1.0 OD1 A:ASP283 4.5 23.4 1.0 N A:LEU255 4.5 22.1 1.0 C A:ASP258 4.5 23.7 1.0 O A:HOH495 4.6 30.2 1.0 N A:PHE257 4.6 25.6 1.0 OD2 A:ASP283 4.6 20.1 1.0 CA A:PHE257 4.6 26.2 1.0 O A:LEU255 4.6 23.8 1.0 C A:LEU255 4.7 23.7 1.0 CA A:LEU255 4.7 24.6 1.0 CB A:ALA254 4.8 22.4 1.0 O A:THR259 4.9 18.8 1.0 CG A:ASP283 4.9 21.8 1.0

Calcium binding site 2 out of 2 in the Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme From Polaromonas Sp. JS666


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme From Polaromonas Sp. JS666 within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca402 b:26.2 occ:1.00 O B:ALA254 2.2 24.1 1.0 O B:HOH406 2.3 29.1 1.0 O B:HOH403 2.3 20.0 1.0 O B:PHE257 2.4 23.0 1.0 O B:HOH405 2.5 26.7 1.0 O B:HOH404 2.5 35.9 1.0 O B:HOH573 2.6 31.2 1.0 C B:ALA254 3.4 23.9 1.0 C B:PHE257 3.6 24.5 1.0 CA B:ALA254 4.0 23.4 1.0 O B:ASP258 4.4 22.0 1.0 CA B:ASP258 4.4 24.7 1.0 N B:ASP258 4.4 23.8 1.0 OD1 B:ASP283 4.5 25.1 1.0 N B:LEU255 4.5 22.4 1.0 C B:ASP258 4.5 23.5 1.0 O B:HOH508 4.5 30.4 1.0 N B:PHE257 4.5 24.9 1.0 CA B:PHE257 4.6 25.4 1.0 OD2 B:ASP283 4.6 19.3 1.0 O B:LEU255 4.6 22.7 1.0 C B:LEU255 4.6 23.1 1.0 CB B:ALA254 4.7 24.1 1.0 CA B:LEU255 4.7 23.9 1.0 O B:THR259 4.8 19.8 1.0 CG B:ASP283 4.9 20.9 1.0 O B:LEU253 5.0 23.6 1.0

D.Kumaran, V.Sridhar, S.K.Burley, S.Swaminathan. Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme From Polaromonas Sp. JS666 To Be Published.