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Calcium in PDB 2omv: Crystal Structure of Inla S192N Y369S/HEC1 Complex

Protein crystallography data

The structure of Crystal Structure of Inla S192N Y369S/HEC1 Complex, PDB code: 2omv was solved by T.Wollert, D.W.Heinz, W.D.Schubert, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 55.373, 87.377, 110.955, 90.00, 90.00, 90.00
R / Rfree (%) 15.3 / 21.9

Other elements in 2omv:

The structure of Crystal Structure of Inla S192N Y369S/HEC1 Complex also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Inla S192N Y369S/HEC1 Complex (pdb code 2omv). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of Inla S192N Y369S/HEC1 Complex, PDB code: 2omv:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 2omv

Go back to Calcium Binding Sites List in 2omv
Calcium binding site 1 out of 2 in the Crystal Structure of Inla S192N Y369S/HEC1 Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Inla S192N Y369S/HEC1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca903

b:53.6
occ:1.00
O A:ASN165 2.6 13.2 1.0
O A:HOH932 2.9 26.1 0.8
C A:ASN165 3.5 16.4 1.0
CA A:ASN165 3.7 18.4 1.0
CB A:ASN165 3.9 16.9 1.0
CG2 A:THR145 3.9 10.2 1.0
OD1 A:ASN167 4.0 29.7 1.0
CB A:SER187 4.0 13.8 1.0
O A:HOH1458 4.2 42.2 1.0
OD1 A:ASN165 4.2 18.2 1.0
OG A:SER187 4.3 14.1 1.0
CG A:ASN165 4.5 20.8 1.0
N A:LEU166 4.7 16.4 1.0
CB A:THR145 4.7 14.4 1.0
CG A:ASN167 4.8 27.2 1.0
O A:HOH1349 4.8 36.1 1.0
CB A:ASN167 4.8 21.4 1.0
C A:LEU166 4.8 14.4 1.0
O A:HOH933 4.9 2.0 0.2
N A:ASN167 4.9 14.5 1.0
O A:LEU166 4.9 13.7 1.0

Calcium binding site 2 out of 2 in 2omv

Go back to Calcium Binding Sites List in 2omv
Calcium binding site 2 out of 2 in the Crystal Structure of Inla S192N Y369S/HEC1 Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of Inla S192N Y369S/HEC1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca902

b:68.7
occ:1.00
OD1 B:ASP67 2.7 20.2 1.0
OE1 B:GLU11 3.0 23.1 1.0
OE1 B:GLU69 3.2 48.6 1.0
CG B:ASP67 3.6 22.3 1.0
CD B:GLU11 3.8 22.9 1.0
OE2 B:GLU11 4.0 27.8 1.0
OD2 B:ASP67 4.0 23.6 1.0
O B:HOH945 4.1 28.0 1.0
CD B:GLU69 4.2 44.9 1.0
CB B:GLU69 4.2 34.3 1.0
N B:GLU69 4.2 29.6 1.0
N B:ARG68 4.4 25.6 1.0
CG B:GLU69 4.5 41.7 1.0
CA B:ASP67 4.7 22.0 1.0
CB B:ASP67 4.8 19.8 1.0
C B:ASP67 4.9 21.5 1.0
CA B:GLU69 4.9 32.3 1.0
OD1 B:ASN12 4.9 35.4 1.0

Reference:

T.Wollert, B.Pasche, M.Rochon, S.Deppenmeier, J.Van Den Heuvel, A.D.Gruber, D.W.Heinz, A.Lengeling, W.D.Schubert. Extending the Host Range of Listeria Monocytogenes By Rational Protein Design. Cell(Cambridge,Mass.) V. 129 891 2007.
ISSN: ISSN 0092-8674
PubMed: 17540170
DOI: 10.1016/J.CELL.2007.03.049
Page generated: Tue Jul 8 07:21:06 2025

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