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Calcium in PDB 2uz0: The Crystal Crystal Structure of the Esta Protein, A Virulence Factor Esta Protein From Streptococcus Pneumonia

Protein crystallography data

The structure of The Crystal Crystal Structure of the Esta Protein, A Virulence Factor Esta Protein From Streptococcus Pneumonia, PDB code: 2uz0 was solved by M.H.Kim, B.S.Kang, K.J.Kim, T.K.Oh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.7
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 71.695, 72.128, 101.827, 90.00, 94.31, 90.00
R / Rfree (%) 18.3 / 21.3

Calcium Binding Sites:

The binding sites of Calcium atom in the The Crystal Crystal Structure of the Esta Protein, A Virulence Factor Esta Protein From Streptococcus Pneumonia (pdb code 2uz0). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the The Crystal Crystal Structure of the Esta Protein, A Virulence Factor Esta Protein From Streptococcus Pneumonia, PDB code: 2uz0:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 2uz0

Go back to Calcium Binding Sites List in 2uz0
Calcium binding site 1 out of 2 in the The Crystal Crystal Structure of the Esta Protein, A Virulence Factor Esta Protein From Streptococcus Pneumonia


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Crystal Crystal Structure of the Esta Protein, A Virulence Factor Esta Protein From Streptococcus Pneumonia within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1258

b:14.3
occ:1.00
O C:HOH2038 2.3 22.8 1.0
O C:LEU53 2.3 14.7 1.0
O A:LEU53 2.3 13.9 1.0
O A:HOH2039 2.3 16.9 1.0
O C:HOH2043 2.3 16.5 1.0
O A:HOH2043 2.4 16.5 1.0
C C:LEU53 3.4 14.8 1.0
C A:LEU53 3.4 12.6 1.0
O A:HOH2040 4.0 16.6 1.0
O C:HOH2040 4.1 16.2 1.0
N C:LYS54 4.2 15.1 1.0
N A:LYS54 4.3 12.4 1.0
CA C:LYS54 4.3 14.6 1.0
CA A:LYS54 4.3 12.7 1.0
CA C:LEU53 4.3 14.7 1.0
CA A:LEU53 4.3 12.8 1.0
O C:THR56 4.5 14.1 1.0
O A:HOH2044 4.5 23.2 1.0
CB A:LEU53 4.5 12.9 1.0
O A:THR56 4.6 11.4 1.0
CB C:LEU53 4.6 14.5 1.0
O C:HOH2020 4.7 32.7 1.0
C C:LYS54 4.7 14.8 1.0
C A:LYS54 4.7 12.3 1.0
OE2 C:GLU59 4.8 17.3 1.0
O C:LYS54 4.8 15.5 1.0
O A:LYS54 4.9 12.5 1.0
OE2 A:GLU59 4.9 16.7 1.0

Calcium binding site 2 out of 2 in 2uz0

Go back to Calcium Binding Sites List in 2uz0
Calcium binding site 2 out of 2 in the The Crystal Crystal Structure of the Esta Protein, A Virulence Factor Esta Protein From Streptococcus Pneumonia


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of The Crystal Crystal Structure of the Esta Protein, A Virulence Factor Esta Protein From Streptococcus Pneumonia within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca1258

b:17.1
occ:1.00
O B:LEU53 2.3 14.3 1.0
O D:LEU53 2.3 19.4 1.0
O B:HOH2038 2.3 16.9 1.0
O B:HOH2035 2.3 20.5 1.0
O D:HOH2036 2.4 17.6 1.0
O B:HOH2040 2.4 15.6 1.0
C D:LEU53 3.4 19.0 1.0
C B:LEU53 3.4 14.4 1.0
O B:HOH2039 4.0 17.7 1.0
O D:HOH2034 4.1 18.4 1.0
N D:LYS54 4.3 18.2 1.0
N B:LYS54 4.3 14.1 1.0
CA D:LEU53 4.3 18.9 1.0
CA D:LYS54 4.3 18.2 1.0
CA B:LEU53 4.3 14.3 1.0
CA B:LYS54 4.3 14.6 1.0
O D:THR56 4.5 18.0 1.0
O B:HOH2041 4.5 28.1 1.0
O B:THR56 4.5 15.8 1.0
CB B:LEU53 4.6 14.1 1.0
CB D:LEU53 4.6 18.9 1.0
O D:HOH2009 4.7 28.8 1.0
C D:LYS54 4.7 18.1 1.0
OE2 D:GLU59 4.8 21.1 1.0
C B:LYS54 4.8 14.6 1.0
O D:LYS54 4.8 18.6 1.0
OE2 B:GLU59 4.8 17.7 1.0
O B:LYS54 4.9 15.4 1.0

Reference:

M.H.Kim, B.S.Kang, S.Kim, K.J.Kim, C.H.Lee, B.C.Oh, S.C.Park, T.K.Oh. The Crystal Structure of the Esta Protein, A Virulence Factor From Streptococcus Pneumoniae. Proteins V. 70 578 2008.
ISSN: ISSN 0887-3585
PubMed: 17932928
DOI: 10.1002/PROT.21680
Page generated: Tue Jul 8 08:27:44 2025

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