Atomistry » Calcium » PDB 3atj-3b1t » 3ayk
Atomistry »
  Calcium »
    PDB 3atj-3b1t »
      3ayk »

Calcium in PDB 3ayk: Catalytic Fragment of Human Fibroblast Collagenase Complexed with Cgs- 27023A, uc(Nmr), Minimized Average Structure

Enzymatic activity of Catalytic Fragment of Human Fibroblast Collagenase Complexed with Cgs- 27023A, uc(Nmr), Minimized Average Structure

All present enzymatic activity of Catalytic Fragment of Human Fibroblast Collagenase Complexed with Cgs- 27023A, uc(Nmr), Minimized Average Structure:
3.4.24.7;

Other elements in 3ayk:

The structure of Catalytic Fragment of Human Fibroblast Collagenase Complexed with Cgs- 27023A, uc(Nmr), Minimized Average Structure also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Catalytic Fragment of Human Fibroblast Collagenase Complexed with Cgs- 27023A, uc(Nmr), Minimized Average Structure (pdb code 3ayk). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Catalytic Fragment of Human Fibroblast Collagenase Complexed with Cgs- 27023A, uc(Nmr), Minimized Average Structure, PDB code: 3ayk:

Calcium binding site 1 out of 1 in 3ayk

Go back to Calcium Binding Sites List in 3ayk
Calcium binding site 1 out of 1 in the Catalytic Fragment of Human Fibroblast Collagenase Complexed with Cgs- 27023A, uc(Nmr), Minimized Average Structure


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Catalytic Fragment of Human Fibroblast Collagenase Complexed with Cgs- 27023A, uc(Nmr), Minimized Average Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca172

b:0.5
occ:1.00
OD2 A:ASP98 3.0 0.7 1.0
O A:GLY78 3.0 0.4 1.0
O A:PRO77 3.0 0.6 1.0
OE2 A:GLU101 3.0 1.0 1.0
HD23 A:LEU81 3.1 1.1 1.0
O A:ASN80 3.2 0.3 1.0
O A:GLY76 3.2 0.5 1.0
HD22 A:LEU81 3.2 1.1 1.0
HA A:PRO77 3.2 0.6 1.0
HA A:LEU81 3.2 0.3 1.0
C A:PRO77 3.3 0.5 1.0
HD1 A:PHE74 3.5 0.4 1.0
CD2 A:LEU81 3.6 0.4 1.0
CA A:PRO77 3.7 0.6 1.0
C A:GLY78 3.7 0.5 1.0
N A:GLY78 3.9 0.5 1.0
CD A:GLU101 3.9 0.7 1.0
C A:ASN80 4.0 0.3 1.0
CG A:ASP98 4.1 0.3 1.0
HG3 A:GLU101 4.1 0.9 1.0
C A:GLY76 4.2 0.5 1.0
CA A:LEU81 4.2 0.2 1.0
HD21 A:LEU81 4.3 1.1 1.0
CA A:GLY78 4.3 0.6 1.0
HB3 A:PHE74 4.3 0.4 1.0
O A:GLY79 4.4 0.4 1.0
HA2 A:GLY78 4.4 0.6 1.0
H A:GLY78 4.4 0.6 1.0
C A:GLY79 4.5 0.4 1.0
N A:PRO77 4.5 0.6 1.0
CD1 A:PHE74 4.5 0.4 1.0
N A:LEU81 4.5 0.2 1.0
CG A:GLU101 4.6 0.5 1.0
N A:GLY79 4.6 0.5 1.0
HB2 A:ASP98 4.6 0.3 1.0
OE1 A:GLU101 4.6 1.4 1.0
HA3 A:GLY79 4.7 0.5 1.0
N A:ASN80 4.8 0.3 1.0
CG A:LEU81 4.8 0.3 1.0
CB A:ASP98 4.8 0.3 1.0
CA A:GLY79 4.9 0.5 1.0
HB3 A:ASP98 4.9 0.3 1.0
OD1 A:ASP98 4.9 0.7 1.0
HB2 A:ASP100 4.9 0.3 1.0
HG A:LEU81 5.0 0.3 1.0
HE1 A:PHE74 5.0 0.4 1.0
CB A:LEU81 5.0 0.3 1.0

Reference:

F.J.Moy, P.K.Chanda, J.M.Chen, S.Cosmi, W.Edris, J.S.Skotnicki, J.Wilhelm, R.Powers. uc(Nmr) Solution Structure of the Catalytic Fragment of Human Fibroblast Collagenase Complexed with A Sulfonamide Derivative of A Hydroxamic Acid Compound. Biochemistry V. 38 7085 1999.
ISSN: ISSN 0006-2960
PubMed: 10353819
DOI: 10.1021/BI982576V
Page generated: Tue Jul 8 10:58:37 2025

Last articles

Mg in 6KI8
Mg in 6KJ6
Mg in 6KF9
Mg in 6KE2
Mg in 6KF4
Mg in 6KF3
Mg in 6KE4
Mg in 6KE0
Mg in 6KDZ
Mg in 6KDX
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy