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Calcium in PDB 3ayk: Catalytic Fragment of Human Fibroblast Collagenase Complexed with Cgs- 27023A, uc(Nmr), Minimized Average Structure

Enzymatic activity of Catalytic Fragment of Human Fibroblast Collagenase Complexed with Cgs- 27023A, uc(Nmr), Minimized Average Structure

All present enzymatic activity of Catalytic Fragment of Human Fibroblast Collagenase Complexed with Cgs- 27023A, uc(Nmr), Minimized Average Structure:
3.4.24.7;

Other elements in 3ayk:

The structure of Catalytic Fragment of Human Fibroblast Collagenase Complexed with Cgs- 27023A, uc(Nmr), Minimized Average Structure also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Catalytic Fragment of Human Fibroblast Collagenase Complexed with Cgs- 27023A, uc(Nmr), Minimized Average Structure (pdb code 3ayk). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Catalytic Fragment of Human Fibroblast Collagenase Complexed with Cgs- 27023A, uc(Nmr), Minimized Average Structure, PDB code: 3ayk:

Calcium binding site 1 out of 1 in 3ayk

Go back to Calcium Binding Sites List in 3ayk
Calcium binding site 1 out of 1 in the Catalytic Fragment of Human Fibroblast Collagenase Complexed with Cgs- 27023A, uc(Nmr), Minimized Average Structure


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Catalytic Fragment of Human Fibroblast Collagenase Complexed with Cgs- 27023A, uc(Nmr), Minimized Average Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca172

b:0.5
occ:1.00
OD2 A:ASP98 3.0 0.7 1.0
O A:GLY78 3.0 0.4 1.0
O A:PRO77 3.0 0.6 1.0
OE2 A:GLU101 3.0 1.0 1.0
HD23 A:LEU81 3.1 1.1 1.0
O A:ASN80 3.2 0.3 1.0
O A:GLY76 3.2 0.5 1.0
HD22 A:LEU81 3.2 1.1 1.0
HA A:PRO77 3.2 0.6 1.0
HA A:LEU81 3.2 0.3 1.0
C A:PRO77 3.3 0.5 1.0
HD1 A:PHE74 3.5 0.4 1.0
CD2 A:LEU81 3.6 0.4 1.0
CA A:PRO77 3.7 0.6 1.0
C A:GLY78 3.7 0.5 1.0
N A:GLY78 3.9 0.5 1.0
CD A:GLU101 3.9 0.7 1.0
C A:ASN80 4.0 0.3 1.0
CG A:ASP98 4.1 0.3 1.0
HG3 A:GLU101 4.1 0.9 1.0
C A:GLY76 4.2 0.5 1.0
CA A:LEU81 4.2 0.2 1.0
HD21 A:LEU81 4.3 1.1 1.0
CA A:GLY78 4.3 0.6 1.0
HB3 A:PHE74 4.3 0.4 1.0
O A:GLY79 4.4 0.4 1.0
HA2 A:GLY78 4.4 0.6 1.0
H A:GLY78 4.4 0.6 1.0
C A:GLY79 4.5 0.4 1.0
N A:PRO77 4.5 0.6 1.0
CD1 A:PHE74 4.5 0.4 1.0
N A:LEU81 4.5 0.2 1.0
CG A:GLU101 4.6 0.5 1.0
N A:GLY79 4.6 0.5 1.0
HB2 A:ASP98 4.6 0.3 1.0
OE1 A:GLU101 4.6 1.4 1.0
HA3 A:GLY79 4.7 0.5 1.0
N A:ASN80 4.8 0.3 1.0
CG A:LEU81 4.8 0.3 1.0
CB A:ASP98 4.8 0.3 1.0
CA A:GLY79 4.9 0.5 1.0
HB3 A:ASP98 4.9 0.3 1.0
OD1 A:ASP98 4.9 0.7 1.0
HB2 A:ASP100 4.9 0.3 1.0
HG A:LEU81 5.0 0.3 1.0
HE1 A:PHE74 5.0 0.4 1.0
CB A:LEU81 5.0 0.3 1.0

Reference:

F.J.Moy, P.K.Chanda, J.M.Chen, S.Cosmi, W.Edris, J.S.Skotnicki, J.Wilhelm, R.Powers. uc(Nmr) Solution Structure of the Catalytic Fragment of Human Fibroblast Collagenase Complexed with A Sulfonamide Derivative of A Hydroxamic Acid Compound. Biochemistry V. 38 7085 1999.
ISSN: ISSN 0006-2960
PubMed: 10353819
DOI: 10.1021/BI982576V
Page generated: Sat Jul 13 08:03:46 2024

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