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Calcium in PDB 3dt5: C_TERMINAL Domain of Protein of Unknown Function AF_0924 From Archaeoglobus Fulgidus.

Protein crystallography data

The structure of C_TERMINAL Domain of Protein of Unknown Function AF_0924 From Archaeoglobus Fulgidus., PDB code: 3dt5 was solved by J.Osipiuk, E.Evdokimova, M.Kudritska, A.Savchenko, A.M.Edwards, A.Joachimiak, Midwest Center For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.00 / 1.94
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 65.413, 65.413, 76.582, 90.00, 90.00, 90.00
R / Rfree (%) 16.9 / 20.2

Calcium Binding Sites:

The binding sites of Calcium atom in the C_TERMINAL Domain of Protein of Unknown Function AF_0924 From Archaeoglobus Fulgidus. (pdb code 3dt5). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the C_TERMINAL Domain of Protein of Unknown Function AF_0924 From Archaeoglobus Fulgidus., PDB code: 3dt5:

Calcium binding site 1 out of 1 in 3dt5

Go back to Calcium Binding Sites List in 3dt5
Calcium binding site 1 out of 1 in the C_TERMINAL Domain of Protein of Unknown Function AF_0924 From Archaeoglobus Fulgidus.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of C_TERMINAL Domain of Protein of Unknown Function AF_0924 From Archaeoglobus Fulgidus. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca301

b:33.4
occ:1.00
O A:ALA136 2.3 38.2 1.0
O A:LYS133 2.4 42.3 1.0
OD1 A:ASP137 2.4 37.7 1.0
OE2 A:GLU106 2.5 40.4 1.0
OE1 A:GLU106 2.5 41.7 1.0
CD A:GLU106 2.9 39.9 1.0
CG A:ASP137 3.3 38.5 1.0
C A:ALA136 3.5 38.4 1.0
C A:LYS133 3.6 43.6 1.0
OD2 A:ASP137 4.0 37.5 1.0
CA A:ASP137 4.1 37.4 1.0
N A:ASP137 4.2 37.8 1.0
CB A:ASP137 4.3 37.1 1.0
CA A:LYS133 4.4 43.0 1.0
CG A:GLU106 4.4 39.1 1.0
N A:ALA136 4.4 41.1 1.0
O A:HOH306 4.5 30.7 1.0
N A:PHE134 4.5 41.3 1.0
CA A:ALA136 4.6 39.1 1.0
CA A:PHE134 4.6 42.0 1.0

Reference:

J.Osipiuk, E.Evdokimova, M.Kudritska, A.Savchenko, A.M.Edwards, A.Joachimiak. X-Ray Crystal Structure of C_TERMINAL Domain of Protein of Unknown Function AF_0924 From Archaeoglobus Fulgidus. To Be Published.
Page generated: Tue Jul 8 11:43:31 2025

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