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Calcium in PDB 3ect: Crystal Structure of the Hexapeptide-Repeat Containing- Acetyltransferase VCA0836 From Vibrio Cholerae

Protein crystallography data

The structure of Crystal Structure of the Hexapeptide-Repeat Containing- Acetyltransferase VCA0836 From Vibrio Cholerae, PDB code: 3ect was solved by Y.Kim, N.Maltseva, K.Kwon, L.Papazisi, J.Hasseman, S.Peterson, W.F.Anderson, A.Joachimiak, Center For Structural Genomics Ofinfectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.26 / 2.51
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 73.319, 73.319, 178.515, 90.00, 90.00, 120.00
R / Rfree (%) 19.3 / 25.1

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the Hexapeptide-Repeat Containing- Acetyltransferase VCA0836 From Vibrio Cholerae (pdb code 3ect). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of the Hexapeptide-Repeat Containing- Acetyltransferase VCA0836 From Vibrio Cholerae, PDB code: 3ect:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 3ect

Go back to Calcium Binding Sites List in 3ect
Calcium binding site 1 out of 2 in the Crystal Structure of the Hexapeptide-Repeat Containing- Acetyltransferase VCA0836 From Vibrio Cholerae


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Hexapeptide-Repeat Containing- Acetyltransferase VCA0836 From Vibrio Cholerae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca193

b:42.6
occ:0.50
O A:GLY147 2.2 26.2 1.0
O A:HOH240 2.4 25.3 1.0
OD2 A:ASP165 2.5 29.2 1.0
OD1 A:ASP165 2.8 31.1 1.0
CG A:ASP165 3.0 32.2 1.0
C A:GLY147 3.4 27.6 1.0
O A:HOH241 4.2 32.0 1.0
CA A:GLY147 4.3 27.4 1.0
N A:VAL148 4.3 27.7 1.0
CA A:VAL148 4.4 28.3 1.0
N A:THR149 4.4 27.6 1.0
CB A:ASP165 4.5 31.8 1.0
C A:VAL148 4.7 28.4 1.0
O A:HOH210 4.8 6.0 0.5
OG1 A:THR149 4.8 33.2 1.0

Calcium binding site 2 out of 2 in 3ect

Go back to Calcium Binding Sites List in 3ect
Calcium binding site 2 out of 2 in the Crystal Structure of the Hexapeptide-Repeat Containing- Acetyltransferase VCA0836 From Vibrio Cholerae


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of the Hexapeptide-Repeat Containing- Acetyltransferase VCA0836 From Vibrio Cholerae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca194

b:89.3
occ:0.33
O A:HOH262 2.3 39.5 1.0
O A:HOH206 2.4 73.9 0.3
OD1 A:ASN141 3.0 42.9 1.0
OD1 A:ASN159 3.5 52.4 1.0
O A:HOH260 3.8 46.4 0.3
CG A:ASN141 3.8 38.6 1.0
ND2 A:ASN141 4.1 41.7 1.0
CG A:ASN159 4.5 48.0 1.0
O A:HOH226 4.5 0.8 1.0
O A:ASN141 4.5 36.1 1.0
ND2 A:ASN159 4.9 50.2 1.0

Reference:

Y.Kim, N.Maltseva, K.Kwon, L.Papazisi, J.Hasseman, S.Peterson, W.F.Anderson, A.Joachimiak. Crystal Structure of the Hexapeptide-Repeat Containing-Acetyltransferase VCA0836 From Vibrio Cholerae To Be Published.
Page generated: Tue Jul 8 11:51:04 2025

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