Calcium in PDB 3fbm: D431N Mutant VP2 Protein of Infectious Bursal Disease Virus; Derived T=1 Particles

The structure of D431N Mutant VP2 Protein of Infectious Bursal Disease Virus; Derived T=1 Particles, PDB code: 3fbm was solved by N.Irigoyen, D.Garriga, A.Navarro, N.Verdaguer, J.F.Rodriguez, J.R.Caston, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 3.10
Space group	P 21 3
Cell size a, b, c (Å), α, β, γ (°)	326.725, 326.725, 326.725, 90.00, 90.00, 90.00
R / Rfree (%)	29.4 / 29.1

The binding sites of Calcium atom in the D431N Mutant VP2 Protein of Infectious Bursal Disease Virus; Derived T=1 Particles (pdb code 3fbm). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the D431N Mutant VP2 Protein of Infectious Bursal Disease Virus; Derived T=1 Particles, PDB code: 3fbm:

Calcium binding site 1 out of 1 in the D431N Mutant VP2 Protein of Infectious Bursal Disease Virus; Derived T=1 Particles


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of D431N Mutant VP2 Protein of Infectious Bursal Disease Virus; Derived T=1 Particles within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca501 b:0.4 occ:0.33 NZ A:LYS399 4.1 24.4 1.0 OD2 A:ASP174 4.1 21.2 1.0 CE A:LYS399 4.2 20.6 1.0 CG A:ASP174 4.8 22.1 1.0 CE A:MET395 4.8 21.5 1.0 OD2 A:ASP31 4.9 23.7 1.0

N.Irigoyen, D.Garriga, A.Navarro, N.Verdaguer, J.F.Rodriguez, J.R.Caston. Autoproteolytic Activity Derived From the Infectious Bursal Disease Virus Capsid Protein J.Biol.Chem. V. 284 8064 2009.
ISSN: ISSN 0021-9258
PubMed: 19144647
DOI: 10.1074/JBC.M808942200