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Calcium in PDB 3g5i: Crystal Structure of the E.Coli Riha Pyrimidine Nucleosidase Bound to A Iminoribitol-Based Inhibitor
Enzymatic activity of Crystal Structure of the E.Coli Riha Pyrimidine Nucleosidase Bound to A Iminoribitol-Based Inhibitor
All present enzymatic activity of Crystal Structure of the E.Coli Riha Pyrimidine Nucleosidase Bound to A Iminoribitol-Based Inhibitor:
3.2.2.8;
3.2.2.8;
Protein crystallography data
The structure of Crystal Structure of the E.Coli Riha Pyrimidine Nucleosidase Bound to A Iminoribitol-Based Inhibitor, PDB code: 3g5i
was solved by
G.Garau,
L.Muzzolini,
P.Tornaghi,
M.Degano,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 37.50 / 2.10 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 84.350, 82.910, 93.870, 90.00, 112.15, 90.00 |
| R / Rfree (%) | 20.3 / 24.1 |
Calcium Binding Sites:
The binding sites of Calcium atom in the Crystal Structure of the E.Coli Riha Pyrimidine Nucleosidase Bound to A Iminoribitol-Based Inhibitor
(pdb code 3g5i). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the Crystal Structure of the E.Coli Riha Pyrimidine Nucleosidase Bound to A Iminoribitol-Based Inhibitor, PDB code: 3g5i:
Jump to Calcium binding site number: 1; 2; 3; 4;
In total 4 binding sites of Calcium where determined in the Crystal Structure of the E.Coli Riha Pyrimidine Nucleosidase Bound to A Iminoribitol-Based Inhibitor, PDB code: 3g5i:
Jump to Calcium binding site number: 1; 2; 3; 4;
Calcium binding site 1 out of 4 in 3g5i
Go back to
Calcium Binding Sites List in 3g5i
Calcium binding site 1 out
of 4 in the Crystal Structure of the E.Coli Riha Pyrimidine Nucleosidase Bound to A Iminoribitol-Based Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Crystal Structure of the E.Coli Riha Pyrimidine Nucleosidase Bound to A Iminoribitol-Based Inhibitor within 5.0Å range:
|
Calcium binding site 2 out of 4 in 3g5i
Go back to
Calcium Binding Sites List in 3g5i
Calcium binding site 2 out
of 4 in the Crystal Structure of the E.Coli Riha Pyrimidine Nucleosidase Bound to A Iminoribitol-Based Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Crystal Structure of the E.Coli Riha Pyrimidine Nucleosidase Bound to A Iminoribitol-Based Inhibitor within 5.0Å range:
|
Calcium binding site 3 out of 4 in 3g5i
Go back to
Calcium Binding Sites List in 3g5i
Calcium binding site 3 out
of 4 in the Crystal Structure of the E.Coli Riha Pyrimidine Nucleosidase Bound to A Iminoribitol-Based Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Crystal Structure of the E.Coli Riha Pyrimidine Nucleosidase Bound to A Iminoribitol-Based Inhibitor within 5.0Å range:
|
Calcium binding site 4 out of 4 in 3g5i
Go back to
Calcium Binding Sites List in 3g5i
Calcium binding site 4 out
of 4 in the Crystal Structure of the E.Coli Riha Pyrimidine Nucleosidase Bound to A Iminoribitol-Based Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Crystal Structure of the E.Coli Riha Pyrimidine Nucleosidase Bound to A Iminoribitol-Based Inhibitor within 5.0Å range:
|
Reference:
G.Garau,
L.Muzzolini,
P.Tornaghi,
M.Degano.
Crystal Structure of the Riha Nucleoside Hydrolase Bound to A Competitive Inhibitor To Be Published.
Page generated: Tue Jul 8 12:36:31 2025
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