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Calcium in PDB 3gci: Crystal Structure of the Complex Formed Between A New Isoform of Phospholipase A2 with C-Terminal Amyloid Beta Heptapeptide at 2 A Resolution

Enzymatic activity of Crystal Structure of the Complex Formed Between A New Isoform of Phospholipase A2 with C-Terminal Amyloid Beta Heptapeptide at 2 A Resolution

All present enzymatic activity of Crystal Structure of the Complex Formed Between A New Isoform of Phospholipase A2 with C-Terminal Amyloid Beta Heptapeptide at 2 A Resolution:
3.1.1.4;

Protein crystallography data

The structure of Crystal Structure of the Complex Formed Between A New Isoform of Phospholipase A2 with C-Terminal Amyloid Beta Heptapeptide at 2 A Resolution, PDB code: 3gci was solved by Z.Mirza, G.Vikram, N.Singh, M.Sinha, A.Bhushan, S.Sharma, A.Srinivasan, P.Kaur, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.51 / 2.04
Space group P 41
Cell size a, b, c (Å), α, β, γ (°) 42.679, 42.679, 65.817, 90.00, 90.00, 90.00
R / Rfree (%) 18.4 / 22.1

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the Complex Formed Between A New Isoform of Phospholipase A2 with C-Terminal Amyloid Beta Heptapeptide at 2 A Resolution (pdb code 3gci). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the Complex Formed Between A New Isoform of Phospholipase A2 with C-Terminal Amyloid Beta Heptapeptide at 2 A Resolution, PDB code: 3gci:

Calcium binding site 1 out of 1 in 3gci

Go back to Calcium Binding Sites List in 3gci
Calcium binding site 1 out of 1 in the Crystal Structure of the Complex Formed Between A New Isoform of Phospholipase A2 with C-Terminal Amyloid Beta Heptapeptide at 2 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Complex Formed Between A New Isoform of Phospholipase A2 with C-Terminal Amyloid Beta Heptapeptide at 2 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca121

b:38.6
occ:0.50
 O A:GLY32 2.4 39.6 1.0
O A:GLY30 2.5 33.9 1.0
O A:LYS31 2.8 39.4 1.0
OD2 A:ASP49 3.0 21.9 1.0
O A:TYR28 3.0 20.4 1.0
O P:ALA7 3.0 33.6 1.0
OD1 A:ASP49 3.2 18.3 1.0
CG A:ASP49 3.2 18.0 1.0
C A:GLY32 3.4 38.8 1.0
C A:LYS31 3.5 38.3 1.0
OXT P:ALA7 3.6 33.6 1.0
C A:GLY30 3.6 32.9 1.0
C P:ALA7 3.8 33.7 1.0
O P:HOH94 3.8 50.6 1.0
O A:HOH138 3.9 73.2 1.0
N A:GLY32 4.0 38.9 1.0
O A:HOH181 4.0 41.8 1.0
C A:TYR28 4.1 19.9 1.0
CA A:GLY32 4.2 39.0 1.0
N A:GLY33 4.3 37.9 1.0
N A:GLY30 4.3 27.0 1.0
CB A:ASP49 4.4 15.2 1.0
CA A:LYS31 4.4 37.5 1.0
N A:LYS31 4.5 35.3 1.0
CA A:GLY30 4.5 30.5 1.0
CA A:GLY33 4.6 36.5 1.0
CA A:TYR28 4.7 19.6 1.0
C A:CYS29 5.0 24.4 1.0

Reference:

Z.Mirza, G.Vikram, N.Singh, M.Sinha, A.Bhushan, S.Sharma, A.Srinivasan, P.Kaur, T.P.Singh. Crystal Structure of the Complex Formed Between A New Isoform of Phospholipase A2 with C-Terminal Amyloid Beta Heptapeptide at 2 A Resolution To Be Published.
Page generated: Tue Jul 8 12:40:55 2025

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