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Calcium in PDB 3gis: Crystal Structure of Na-Free Thrombin in Complex with Thrombomodulin
Enzymatic activity of Crystal Structure of Na-Free Thrombin in Complex with Thrombomodulin
All present enzymatic activity of Crystal Structure of Na-Free Thrombin in Complex with Thrombomodulin:
3.4.21.5;
3.4.21.5;
Protein crystallography data
The structure of Crystal Structure of Na-Free Thrombin in Complex with Thrombomodulin, PDB code: 3gis
was solved by
T.E.Adams,
J.A.Huntington,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 40.00 / 2.40 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 66.250, 100.340, 229.280, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 21.1 / 25.9 |
Calcium Binding Sites:
The binding sites of Calcium atom in the Crystal Structure of Na-Free Thrombin in Complex with Thrombomodulin
(pdb code 3gis). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 3 binding sites of Calcium where determined in the Crystal Structure of Na-Free Thrombin in Complex with Thrombomodulin, PDB code: 3gis:
Jump to Calcium binding site number: 1; 2; 3;
In total 3 binding sites of Calcium where determined in the Crystal Structure of Na-Free Thrombin in Complex with Thrombomodulin, PDB code: 3gis:
Jump to Calcium binding site number: 1; 2; 3;
Calcium binding site 1 out of 3 in 3gis
Go back to
Calcium Binding Sites List in 3gis
Calcium binding site 1 out
of 3 in the Crystal Structure of Na-Free Thrombin in Complex with Thrombomodulin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Crystal Structure of Na-Free Thrombin in Complex with Thrombomodulin within 5.0Å range:
|
Calcium binding site 2 out of 3 in 3gis
Go back to
Calcium Binding Sites List in 3gis
Calcium binding site 2 out
of 3 in the Crystal Structure of Na-Free Thrombin in Complex with Thrombomodulin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Crystal Structure of Na-Free Thrombin in Complex with Thrombomodulin within 5.0Å range:
|
Calcium binding site 3 out of 3 in 3gis
Go back to
Calcium Binding Sites List in 3gis
Calcium binding site 3 out
of 3 in the Crystal Structure of Na-Free Thrombin in Complex with Thrombomodulin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Crystal Structure of Na-Free Thrombin in Complex with Thrombomodulin within 5.0Å range:
|
Reference:
T.E.Adams,
W.Li,
J.A.Huntington.
Molecular Basis of Thrombomodulin Activation of Slow Thrombin J.Thromb.Haemost. V. 7 1688 2009.
ISSN: ISSN 1538-7933
PubMed: 19656282
DOI: 10.1111/J.1538-7836.2009.03563.X
Page generated: Tue Jul 8 12:45:09 2025
ISSN: ISSN 1538-7933
PubMed: 19656282
DOI: 10.1111/J.1538-7836.2009.03563.X
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