Atomistry » Calcium » PDB 3gif-3gy5 » 3goa
Atomistry »
  Calcium »
    PDB 3gif-3gy5 »
      3goa »

Calcium in PDB 3goa: Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase

Enzymatic activity of Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase

All present enzymatic activity of Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase:
2.3.1.16;

Protein crystallography data

The structure of Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase, PDB code: 3goa was solved by S.M.Anderson, T.Skarina, O.Onopriyenko, Z.Wawrzak, L.Papazisi, A.Savchenko, W.F.Anderson, Center For Structural Genomics Ofinfectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.70
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 73.000, 64.500, 74.400, 90.00, 104.50, 90.00
R / Rfree (%) 14.2 / 19.2

Other elements in 3goa:

The structure of Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms
Sodium (Na) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase (pdb code 3goa). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase, PDB code: 3goa:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 3goa

Go back to Calcium Binding Sites List in 3goa
Calcium binding site 1 out of 2 in the Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca388

b:29.4
occ:1.00
O B:HOH694 2.2 19.1 1.0
O B:HOH756 2.3 31.9 1.0
O B:HOH419 2.4 27.5 1.0
O B:HOH773 2.5 26.4 1.0
O B:HOH857 3.8 33.1 1.0
O B:HOH728 4.2 20.2 1.0
O B:HOH494 4.4 16.6 1.0
O B:HOH961 4.4 17.8 0.5
O B:HOH623 4.5 22.9 1.0
OD1 B:ASN42 4.6 15.3 1.0
OD2 B:ASP8 4.8 11.7 1.0
CG B:ASP8 4.8 14.1 1.0
OD1 B:ASP8 4.8 12.4 1.0
O B:VAL7 4.8 11.8 1.0
NH2 B:ARG41 5.0 16.0 1.0
O B:ARG41 5.0 14.2 1.0

Calcium binding site 2 out of 2 in 3goa

Go back to Calcium Binding Sites List in 3goa
Calcium binding site 2 out of 2 in the Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca389

b:54.6
occ:1.00
O B:HOH935 2.3 27.6 1.0
O B:HOH936 2.3 41.6 1.0
O B:HOH601 2.4 31.5 1.0
O B:HOH512 2.6 27.7 1.0
O B:HOH835 2.7 40.3 1.0
OE1 B:GLN366 4.1 22.9 1.0
O B:HOH572 4.4 30.4 1.0
OD1 B:ASP303 4.4 20.3 1.0
O B:ASP301 4.4 15.6 1.0
O B:HOH788 4.5 43.0 1.0
OD2 B:ASP303 4.7 18.2 1.0

Reference:

S.M.Anderson, T.Skarina, O.Onopriyenko, Z.Wawrzak, L.Papazisi, A.Savchenko, W.F.Anderson, Center For Structural Genomics Ofinfectious Diseases (Csgid). N/A N/A.
Page generated: Tue Jul 8 12:46:55 2025

Last articles

Mg in 5MH5
Mg in 5MGY
Mg in 5MFM
Mg in 5MH1
Mg in 5MGA
Mg in 5M73
Mg in 5MFL
Mg in 5MF4
Mg in 5MF5
Mg in 5MCP
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy