Atomistry » Calcium » PDB 3hjb-3hz3 » 3hvd
Atomistry »
  Calcium »
    PDB 3hjb-3hz3 »
      3hvd »

Calcium in PDB 3hvd: The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes

Protein crystallography data

The structure of The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes, PDB code: 3hvd was solved by A.F.Kintzer, K.C.Dong, J.M.Berger, B.A.Krantz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.27 / 3.21
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 125.602, 125.670, 125.823, 106.64, 110.82, 110.98
R / Rfree (%) 21 / 24.9

Calcium Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 16;

Binding sites:

The binding sites of Calcium atom in the The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes (pdb code 3hvd). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 16 binding sites of Calcium where determined in the The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes, PDB code: 3hvd:
Jump to Calcium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Calcium binding site 1 out of 16 in 3hvd

Go back to Calcium Binding Sites List in 3hvd
Calcium binding site 1 out of 16 in the The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca736

b:35.9
occ:1.00
O A:HOH739 1.9 19.6 1.0
O A:ILE183 2.4 36.8 1.0
OD1 A:ASP179 2.4 33.0 1.0
OD1 A:ASP177 2.4 50.8 1.0
OE2 A:GLU188 2.4 29.2 1.0
OD1 A:ASP181 2.4 35.4 1.0
CG A:ASP179 3.1 39.2 1.0
OD2 A:ASP179 3.2 48.3 1.0
CD A:GLU188 3.5 33.3 1.0
C A:ILE183 3.5 42.5 1.0
CG A:ASP177 3.5 50.6 1.0
CG A:ASP181 3.6 49.5 1.0
O A:PRO223 4.0 13.5 1.0
CA A:ASP177 4.1 27.0 1.0
C A:PRO184 4.2 30.6 1.0
OD2 A:ASP181 4.2 69.9 1.0
OE1 A:GLU188 4.2 30.1 1.0
N A:ASP181 4.2 35.9 1.0
CA A:CA737 4.2 20.4 1.0
O A:PRO184 4.2 27.4 1.0
CA A:PRO223 4.3 18.1 1.0
OD1 A:ASP185 4.3 36.8 1.0
C A:ASP177 4.3 30.9 1.0
CB A:ASP177 4.4 34.9 1.0
OD2 A:ASP177 4.4 45.9 1.0
N A:PRO184 4.4 30.2 1.0
CA A:ILE183 4.4 43.7 1.0
CG A:GLU188 4.5 28.2 1.0
N A:ASN180 4.5 26.0 1.0
CA A:PRO184 4.5 28.6 1.0
C A:PRO223 4.5 22.2 1.0
CB A:ILE183 4.5 32.0 1.0
N A:ASP179 4.5 37.0 1.0
N A:ILE183 4.5 53.5 1.0
N A:ASP185 4.5 30.2 1.0
CB A:ASP179 4.5 37.8 1.0
N A:ARG178 4.6 9.7 1.0
CB A:ASP181 4.7 41.1 1.0
CA A:ASP181 4.8 41.8 1.0
O A:ASP177 4.8 43.7 1.0
CA A:ASP185 4.9 25.1 1.0
C A:ASP181 4.9 36.5 1.0
CA A:ASP179 4.9 38.7 1.0
C A:ASP179 5.0 34.8 1.0

Calcium binding site 2 out of 16 in 3hvd

Go back to Calcium Binding Sites List in 3hvd
Calcium binding site 2 out of 16 in the The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca737

b:20.4
occ:1.00
OD2 A:ASP179 2.4 48.3 1.0
OD2 A:ASP235 2.4 40.6 1.0
OD2 A:ASP181 2.4 69.9 1.0
OE1 A:GLU188 2.4 30.1 1.0
O A:SER222 2.4 31.1 1.0
O A:LYS225 2.4 34.1 1.0
CD A:GLU188 3.1 33.3 1.0
OE2 A:GLU188 3.1 29.2 1.0
CG A:ASP179 3.2 39.2 1.0
CG A:ASP181 3.2 49.5 1.0
CG A:ASP235 3.3 37.5 1.0
C A:LYS225 3.5 18.6 1.0
OD1 A:ASP181 3.5 35.4 1.0
C A:SER222 3.6 27.6 1.0
CB A:ASP235 3.8 24.2 1.0
OD1 A:ASP179 3.8 33.0 1.0
CB A:ASP179 4.2 37.8 1.0
N A:LYS225 4.2 32.0 1.0
CA A:CA736 4.2 35.9 1.0
OD1 A:ASP235 4.3 42.5 1.0
OG A:SER221 4.3 30.5 1.0
OG1 A:THR228 4.3 40.5 1.0
N A:TRP226 4.3 21.1 1.0
CA A:LYS225 4.4 21.6 1.0
N A:SER222 4.4 23.3 1.0
N A:PRO223 4.4 33.0 1.0
CA A:TRP226 4.4 14.3 1.0
CA A:PRO223 4.5 18.1 1.0
O A:TRP226 4.5 25.0 1.0
CB A:ASP181 4.5 41.1 1.0
C A:TRP226 4.5 21.2 1.0
CA A:SER222 4.5 19.2 1.0
CG A:GLU188 4.6 28.2 1.0
CB A:SER221 4.6 22.6 1.0
C A:PRO223 4.7 22.2 1.0
N A:GLU224 4.9 32.2 1.0
CB A:LYS225 5.0 5.1 1.0
O A:HOH739 5.0 19.6 1.0

Calcium binding site 3 out of 16 in 3hvd

Go back to Calcium Binding Sites List in 3hvd
Calcium binding site 3 out of 16 in the The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca736

b:56.0
occ:1.00
O B:HOH739 1.9 65.7 1.0
O B:ILE183 2.4 48.0 1.0
OD1 B:ASP177 2.4 55.0 1.0
OE2 B:GLU188 2.4 28.5 1.0
OD1 B:ASP179 2.4 37.1 1.0
OD1 B:ASP181 2.4 44.6 1.0
CG B:ASP179 3.2 39.5 1.0
CG B:ASP181 3.3 48.8 1.0
OD2 B:ASP179 3.3 39.1 1.0
OD2 B:ASP181 3.5 46.8 1.0
C B:ILE183 3.6 52.2 1.0
CG B:ASP177 3.6 57.0 1.0
CD B:GLU188 3.6 36.0 1.0
OD1 B:ASP185 3.9 31.8 1.0
CA B:ASP177 4.2 32.9 1.0
O B:PRO223 4.2 24.4 1.0
CA B:CA737 4.2 20.5 1.0
N B:ASN180 4.3 16.6 1.0
N B:ASP179 4.3 34.3 1.0
C B:ASP177 4.3 31.8 1.0
N B:ILE183 4.3 51.9 1.0
N B:ASP181 4.4 39.0 1.0
N B:ARG178 4.4 15.9 1.0
CA B:ILE183 4.4 42.8 1.0
OE1 B:GLU188 4.4 46.6 1.0
CA B:PRO223 4.4 25.0 1.0
N B:ASP185 4.4 29.9 1.0
C B:PRO184 4.4 36.3 1.0
OD2 B:ASP177 4.5 50.5 1.0
CB B:ASP177 4.5 50.5 1.0
CB B:ASP179 4.5 31.8 1.0
N B:PRO184 4.5 33.2 1.0
CG B:GLU188 4.6 29.8 1.0
C B:PRO223 4.6 27.5 1.0
CB B:ILE183 4.6 30.8 1.0
CB B:ASP181 4.6 51.3 1.0
CA B:PRO184 4.6 30.1 1.0
CA B:ASP179 4.8 32.1 1.0
CA B:ASP185 4.8 24.5 1.0
O B:PRO184 4.8 26.3 1.0
C B:ASP179 4.9 25.3 1.0
O B:ASP177 4.9 44.1 1.0
CA B:ASP181 5.0 46.0 1.0

Calcium binding site 4 out of 16 in 3hvd

Go back to Calcium Binding Sites List in 3hvd
Calcium binding site 4 out of 16 in the The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca737

b:20.5
occ:1.00
OD2 B:ASP179 2.4 39.1 1.0
OE1 B:GLU188 2.4 46.6 1.0
O B:LYS225 2.4 26.3 1.0
OD2 B:ASP235 2.4 43.7 1.0
OD2 B:ASP181 2.4 46.8 1.0
O B:SER222 2.4 40.4 1.0
CD B:GLU188 3.1 36.0 1.0
OE2 B:GLU188 3.1 28.5 1.0
CG B:ASP179 3.3 39.5 1.0
C B:LYS225 3.5 26.5 1.0
CG B:ASP235 3.5 53.3 1.0
C B:SER222 3.5 30.6 1.0
CG B:ASP181 3.6 48.8 1.0
OD1 B:ASP179 3.7 37.1 1.0
CB B:ASP235 4.0 42.7 1.0
N B:LYS225 4.2 36.5 1.0
CA B:CA736 4.2 56.0 1.0
OD1 B:ASP181 4.2 44.6 1.0
N B:PRO223 4.3 29.2 1.0
CA B:PRO223 4.3 25.0 1.0
N B:TRP226 4.3 36.6 1.0
O B:TRP226 4.4 54.0 1.0
CA B:LYS225 4.4 29.2 1.0
C B:TRP226 4.4 38.2 1.0
OG1 B:THR228 4.4 40.8 1.0
CB B:ASP179 4.4 31.8 1.0
N B:SER222 4.4 23.1 1.0
CA B:TRP226 4.4 27.3 1.0
OG B:SER221 4.4 25.8 1.0
CA B:SER222 4.5 25.5 1.0
C B:PRO223 4.6 27.5 1.0
OD1 B:ASP235 4.6 68.2 1.0
CG B:GLU188 4.6 29.8 1.0
CB B:ASP181 4.6 51.3 1.0
CB B:SER221 4.7 19.3 1.0
O B:HOH739 4.7 65.7 1.0
N B:GLU224 4.7 33.2 1.0
CB B:LYS225 4.9 7.2 1.0

Calcium binding site 5 out of 16 in 3hvd

Go back to Calcium Binding Sites List in 3hvd
Calcium binding site 5 out of 16 in the The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 5 of The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca736

b:33.4
occ:1.00
O C:HOH739 2.2 48.5 1.0
O C:ILE183 2.4 37.2 1.0
OE2 C:GLU188 2.4 24.1 1.0
OD1 C:ASP177 2.5 62.9 1.0
OD1 C:ASP181 2.5 43.0 1.0
OD1 C:ASP179 2.5 25.7 1.0
CG C:ASP179 3.2 31.1 1.0
OD2 C:ASP179 3.2 40.4 1.0
C C:ILE183 3.5 41.8 1.0
CD C:GLU188 3.5 28.6 1.0
CG C:ASP177 3.6 66.2 1.0
CG C:ASP181 3.7 52.7 1.0
O C:PRO223 4.1 14.3 1.0
CA C:ASP177 4.1 39.8 1.0
C C:PRO184 4.2 34.1 1.0
O C:PRO184 4.2 33.3 1.0
OE1 C:GLU188 4.2 26.8 1.0
CA C:CA737 4.2 18.8 1.0
N C:ASP181 4.2 39.5 1.0
OD2 C:ASP181 4.2 71.3 1.0
OD1 C:ASP185 4.3 36.4 1.0
CA C:PRO223 4.4 17.3 1.0
N C:PRO184 4.4 32.5 1.0
CA C:ILE183 4.4 42.4 1.0
CB C:ASP177 4.4 49.5 1.0
C C:ASP177 4.4 45.8 1.0
OD2 C:ASP177 4.4 64.5 1.0
CG C:GLU188 4.4 22.1 1.0
CB C:ILE183 4.5 31.2 1.0
CA C:PRO184 4.5 31.1 1.0
N C:ILE183 4.5 51.3 1.0
N C:ASP185 4.5 26.6 1.0
N C:ASN180 4.5 26.0 1.0
C C:PRO223 4.6 20.1 1.0
N C:ASP179 4.6 28.6 1.0
CB C:ASP179 4.6 28.6 1.0
N C:ARG178 4.6 17.3 1.0
CB C:ASP181 4.8 42.7 1.0
CA C:ASP181 4.8 43.9 1.0
CA C:ASP185 4.9 25.0 1.0
C C:ASP181 4.9 39.0 1.0
O C:ASP177 4.9 60.8 1.0
CA C:ASP179 5.0 31.5 1.0

Calcium binding site 6 out of 16 in 3hvd

Go back to Calcium Binding Sites List in 3hvd
Calcium binding site 6 out of 16 in the The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 6 of The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca737

b:18.8
occ:1.00
OD2 C:ASP179 2.4 40.4 1.0
OD2 C:ASP235 2.5 49.0 1.0
OD2 C:ASP181 2.5 71.3 1.0
OE1 C:GLU188 2.5 26.8 1.0
O C:SER222 2.5 40.0 1.0
O C:LYS225 2.5 40.9 1.0
OE2 C:GLU188 3.1 24.1 1.0
CD C:GLU188 3.2 28.6 1.0
CG C:ASP181 3.3 52.7 1.0
CG C:ASP179 3.3 31.1 1.0
CG C:ASP235 3.3 45.6 1.0
OD1 C:ASP181 3.5 43.0 1.0
C C:LYS225 3.5 26.5 1.0
C C:SER222 3.6 34.5 1.0
CB C:ASP235 3.8 31.7 1.0
OD1 C:ASP179 3.8 25.7 1.0
CA C:CA736 4.2 33.4 1.0
CB C:ASP179 4.2 28.6 1.0
N C:LYS225 4.2 40.4 1.0
OG C:SER221 4.3 26.5 1.0
OD1 C:ASP235 4.3 52.2 1.0
OG1 C:THR228 4.4 35.6 1.0
N C:TRP226 4.4 29.9 1.0
CA C:LYS225 4.4 30.8 1.0
N C:SER222 4.4 32.5 1.0
CA C:TRP226 4.4 22.5 1.0
N C:PRO223 4.5 29.0 1.0
O C:TRP226 4.5 31.1 1.0
CA C:PRO223 4.5 17.3 1.0
C C:TRP226 4.5 25.1 1.0
CB C:ASP181 4.5 42.7 1.0
CA C:SER222 4.6 24.5 1.0
CB C:SER221 4.6 21.1 1.0
CG C:GLU188 4.6 22.1 1.0
C C:PRO223 4.7 20.1 1.0
N C:GLU224 4.9 41.1 1.0
CB C:LYS225 5.0 7.5 1.0

Calcium binding site 7 out of 16 in 3hvd

Go back to Calcium Binding Sites List in 3hvd
Calcium binding site 7 out of 16 in the The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 7 of The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ca736

b:44.2
occ:1.00
O D:HOH739 1.9 70.4 1.0
O D:ILE183 2.4 43.3 1.0
OE2 D:GLU188 2.4 26.9 1.0
OD1 D:ASP177 2.4 50.9 1.0
OD1 D:ASP181 2.4 30.7 1.0
OD1 D:ASP179 2.4 40.6 1.0
CG D:ASP179 3.2 40.0 1.0
CG D:ASP181 3.3 34.8 1.0
OD2 D:ASP179 3.3 38.4 1.0
OD2 D:ASP181 3.5 33.8 1.0
C D:ILE183 3.6 46.0 1.0
CD D:GLU188 3.6 34.2 1.0
CG D:ASP177 3.6 54.0 1.0
OD1 D:ASP185 3.9 38.9 1.0
O D:PRO223 4.1 23.3 1.0
CA D:ASP177 4.2 31.2 1.0
CA D:CA737 4.2 25.4 1.0
N D:ASN180 4.3 10.7 1.0
N D:ASP179 4.3 31.0 1.0
N D:ILE183 4.3 44.2 1.0
C D:ASP177 4.3 27.5 1.0
N D:ASP181 4.4 25.8 1.0
CA D:ILE183 4.4 36.3 1.0
OE1 D:GLU188 4.4 43.7 1.0
N D:ARG178 4.4 13.5 1.0
CA D:PRO223 4.4 21.8 1.0
C D:PRO184 4.4 30.0 1.0
N D:ASP185 4.4 34.2 1.0
OD2 D:ASP177 4.5 49.3 1.0
CB D:ASP177 4.5 46.9 1.0
CB D:ASP179 4.5 32.6 1.0
N D:PRO184 4.5 27.9 1.0
CG D:GLU188 4.6 28.1 1.0
C D:PRO223 4.6 26.4 1.0
CB D:ILE183 4.6 22.8 1.0
CB D:ASP181 4.6 39.2 1.0
CA D:PRO184 4.6 24.2 1.0
CA D:ASP185 4.8 32.6 1.0
O D:PRO184 4.8 19.8 1.0
CA D:ASP179 4.8 32.2 1.0
C D:ASP179 4.9 24.8 1.0
CA D:ASP181 5.0 35.0 1.0
O D:ASP177 5.0 39.9 1.0

Calcium binding site 8 out of 16 in 3hvd

Go back to Calcium Binding Sites List in 3hvd
Calcium binding site 8 out of 16 in the The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 8 of The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ca737

b:25.4
occ:1.00
OD2 D:ASP179 2.4 38.4 1.0
OE1 D:GLU188 2.4 43.7 1.0
OD2 D:ASP181 2.4 33.8 1.0
O D:LYS225 2.4 19.4 1.0
OD2 D:ASP235 2.4 40.4 1.0
O D:SER222 2.4 44.2 1.0
CD D:GLU188 3.1 34.2 1.0
OE2 D:GLU188 3.1 26.9 1.0
CG D:ASP179 3.3 40.0 1.0
C D:LYS225 3.5 20.9 1.0
CG D:ASP235 3.5 49.2 1.0
C D:SER222 3.6 34.3 1.0
CG D:ASP181 3.6 34.8 1.0
OD1 D:ASP179 3.7 40.6 1.0
CB D:ASP235 4.0 40.0 1.0
N D:LYS225 4.2 32.7 1.0
CA D:CA736 4.2 44.2 1.0
OD1 D:ASP181 4.2 30.7 1.0
CA D:PRO223 4.3 21.8 1.0
N D:PRO223 4.3 21.7 1.0
N D:TRP226 4.3 27.9 1.0
O D:TRP226 4.4 47.8 1.0
CA D:LYS225 4.4 25.0 1.0
CB D:ASP179 4.4 32.6 1.0
C D:TRP226 4.4 30.2 1.0
OG1 D:THR228 4.4 22.1 1.0
CA D:TRP226 4.4 19.5 1.0
OG D:SER221 4.5 31.6 1.0
N D:SER222 4.5 28.5 1.0
CA D:SER222 4.6 32.1 1.0
C D:PRO223 4.6 26.4 1.0
CB D:ASP181 4.6 39.2 1.0
CG D:GLU188 4.6 28.1 1.0
OD1 D:ASP235 4.6 63.4 1.0
CB D:SER221 4.7 27.2 1.0
O D:HOH739 4.7 70.4 1.0
N D:GLU224 4.7 40.9 1.0
CB D:LYS225 4.9 5.0 1.0

Calcium binding site 9 out of 16 in 3hvd

Go back to Calcium Binding Sites List in 3hvd
Calcium binding site 9 out of 16 in the The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 9 of The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Ca736

b:38.7
occ:1.00
O E:HOH739 1.9 41.2 1.0
O E:ILE183 2.4 41.2 1.0
OD1 E:ASP179 2.4 40.8 1.0
OD1 E:ASP177 2.4 57.4 1.0
OE2 E:GLU188 2.4 32.8 1.0
OD1 E:ASP181 2.4 36.4 1.0
CG E:ASP179 3.1 48.1 1.0
OD2 E:ASP179 3.2 57.0 1.0
CD E:GLU188 3.5 39.5 1.0
C E:ILE183 3.5 48.0 1.0
CG E:ASP177 3.6 56.3 1.0
CG E:ASP181 3.6 47.5 1.0
O E:PRO223 4.0 12.1 1.0
CA E:ASP177 4.1 31.6 1.0
OD2 E:ASP181 4.2 67.1 1.0
OE1 E:GLU188 4.2 36.7 1.0
C E:PRO184 4.2 26.9 1.0
N E:ASP181 4.2 31.8 1.0
CA E:CA737 4.2 24.3 1.0
O E:PRO184 4.2 24.6 1.0
CA E:PRO223 4.3 16.8 1.0
OD1 E:ASP185 4.3 35.5 1.0
C E:ASP177 4.4 36.9 1.0
CB E:ASP177 4.4 38.5 1.0
OD2 E:ASP177 4.4 54.4 1.0
CA E:ILE183 4.4 50.2 1.0
N E:PRO184 4.4 26.5 1.0
CG E:GLU188 4.5 34.4 1.0
N E:ASN180 4.5 17.7 1.0
CA E:PRO184 4.5 24.6 1.0
CB E:ILE183 4.5 38.4 1.0
C E:PRO223 4.5 21.3 1.0
N E:ILE183 4.5 57.4 1.0
N E:ASP179 4.5 44.3 1.0
N E:ASP185 4.5 26.1 1.0
CB E:ASP179 4.5 45.3 1.0
N E:ARG178 4.6 8.6 1.0
CB E:ASP181 4.7 38.9 1.0
CA E:ASP181 4.8 39.1 1.0
O E:ASP177 4.9 50.3 1.0
CA E:ASP185 4.9 23.2 1.0
C E:ASP181 4.9 32.9 1.0
CA E:ASP179 4.9 46.5 1.0
C E:ASP179 5.0 40.8 1.0

Calcium binding site 10 out of 16 in 3hvd

Go back to Calcium Binding Sites List in 3hvd
Calcium binding site 10 out of 16 in the The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 10 of The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Ca737

b:24.3
occ:1.00
OD2 E:ASP179 2.4 57.0 1.0
OD2 E:ASP235 2.4 44.1 1.0
O E:LYS225 2.4 36.6 1.0
O E:SER222 2.4 36.6 1.0
OE1 E:GLU188 2.4 36.7 1.0
OD2 E:ASP181 2.4 67.1 1.0
CD E:GLU188 3.2 39.5 1.0
OE2 E:GLU188 3.2 32.8 1.0
CG E:ASP179 3.2 48.1 1.0
CG E:ASP181 3.3 47.5 1.0
CG E:ASP235 3.3 40.9 1.0
C E:LYS225 3.5 22.6 1.0
OD1 E:ASP181 3.5 36.4 1.0
C E:SER222 3.6 31.9 1.0
CB E:ASP235 3.8 24.6 1.0
OD1 E:ASP179 3.8 40.8 1.0
N E:LYS225 4.2 38.6 1.0
CB E:ASP179 4.2 45.3 1.0
CA E:CA736 4.2 38.7 1.0
OD1 E:ASP235 4.3 50.2 1.0
OG E:SER221 4.3 35.7 1.0
OG1 E:THR228 4.3 37.3 1.0
N E:TRP226 4.3 24.4 1.0
CA E:LYS225 4.4 29.1 1.0
N E:SER222 4.4 28.5 1.0
N E:PRO223 4.4 30.1 1.0
CA E:TRP226 4.4 18.6 1.0
O E:TRP226 4.5 21.3 1.0
CA E:PRO223 4.5 16.8 1.0
C E:TRP226 4.5 20.1 1.0
CB E:ASP181 4.5 38.9 1.0
CA E:SER222 4.5 23.2 1.0
CB E:SER221 4.6 31.1 1.0
CG E:GLU188 4.6 34.4 1.0
C E:PRO223 4.7 21.3 1.0
N E:GLU224 4.9 33.9 1.0
CB E:LYS225 4.9 5.7 1.0
O E:HOH739 5.0 41.2 1.0

Reference:

A.F.Kintzer, K.L.Thoren, H.J.Sterling, K.C.Dong, G.K.Feld, I.I.Tang, T.T.Zhang, E.R.Williams, J.M.Berger, B.A.Krantz. The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes. J.Mol.Biol. V. 392 614 2009.
ISSN: ISSN 0022-2836
PubMed: 19627991
DOI: 10.1016/J.JMB.2009.07.037
Page generated: Sat Jul 13 11:12:51 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy