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Calcium in PDB 3i4p: Crystal Structure of Asnc Family Transcriptional Regulator From Agrobacterium Tumefaciens

Protein crystallography data

The structure of Crystal Structure of Asnc Family Transcriptional Regulator From Agrobacterium Tumefaciens, PDB code: 3i4p was solved by M.Cymborowski, M.Chruszcz, H.Luo, X.Xu, A.Savchenko, A.Edwards, A.Joachimiak, W.Minor, Midwest Center For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.30
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 141.833, 141.833, 50.283, 90.00, 90.00, 90.00
R / Rfree (%) 18.8 / 21.4

Other elements in 3i4p:

The structure of Crystal Structure of Asnc Family Transcriptional Regulator From Agrobacterium Tumefaciens also contains other interesting chemical elements:

Chlorine (Cl) 5 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Asnc Family Transcriptional Regulator From Agrobacterium Tumefaciens (pdb code 3i4p). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Asnc Family Transcriptional Regulator From Agrobacterium Tumefaciens, PDB code: 3i4p:

Calcium binding site 1 out of 1 in 3i4p

Go back to Calcium Binding Sites List in 3i4p
Calcium binding site 1 out of 1 in the Crystal Structure of Asnc Family Transcriptional Regulator From Agrobacterium Tumefaciens


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Asnc Family Transcriptional Regulator From Agrobacterium Tumefaciens within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca167

b:81.4
occ:1.00
O A:HOH235 2.4 30.7 1.0
O A:HOH251 2.5 31.8 1.0
O A:HOH239 2.6 24.6 1.0
O A:GLY100 2.7 27.7 1.0
CL A:CL168 3.0 49.0 1.0
O A:HOH267 3.4 23.0 1.0
OD1 A:ASP103 3.7 31.5 1.0
C A:GLY100 3.8 28.6 1.0
O A:HOH276 4.1 22.9 1.0
N A:GLY100 4.1 29.1 1.0
O A:VAL102 4.1 30.4 1.0
CH3 A:ACT169 4.4 85.5 1.0
C A:VAL102 4.5 29.8 1.0
CA A:GLY100 4.6 28.7 1.0
C A:SER99 4.6 28.8 1.0
C A:ASP101 4.7 29.9 1.0
CG A:ASP103 4.7 29.3 1.0
O A:MSE98 4.7 26.7 1.0
O A:ASP101 4.8 29.6 1.0
CA A:SER99 4.8 28.4 1.0
CA A:ASP103 4.8 28.1 1.0
N A:VAL102 4.8 30.4 1.0
N A:ASP103 4.8 29.0 1.0
N A:ASP101 4.9 29.1 1.0
CA A:ASP101 5.0 30.1 1.0

Reference:

M.Cymborowski, M.Chruszcz, H.Luo, X.Xu, A.Savchenko, A.Edwards, A.Joachimiak, W.Minor. Crystal Structure of Asnc Family Transcriptional Regulator From Agrobacterium Tumefaciens To Be Published.
Page generated: Tue Jul 8 13:12:45 2025

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