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Calcium in PDB 3lag: The Crystal Structure of A Functionally Unknown Protein RPA4178 From Rhodopseudomonas Palustris CGA009

Protein crystallography data

The structure of The Crystal Structure of A Functionally Unknown Protein RPA4178 From Rhodopseudomonas Palustris CGA009, PDB code: 3lag was solved by K.Tan, E.Evdokimova, M.Kudritska, A.Savchenko, A.Edwards, A.Joachimiak, Midwest Center For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.98 / 1.15
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 42.871, 59.243, 65.380, 90.00, 90.00, 90.00
R / Rfree (%) 18.5 / 22.1

Other elements in 3lag:

The structure of The Crystal Structure of A Functionally Unknown Protein RPA4178 From Rhodopseudomonas Palustris CGA009 also contains other interesting chemical elements:

Nickel (Ni) 2 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the The Crystal Structure of A Functionally Unknown Protein RPA4178 From Rhodopseudomonas Palustris CGA009 (pdb code 3lag). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the The Crystal Structure of A Functionally Unknown Protein RPA4178 From Rhodopseudomonas Palustris CGA009, PDB code: 3lag:

Calcium binding site 1 out of 1 in 3lag

Go back to Calcium Binding Sites List in 3lag
Calcium binding site 1 out of 1 in the The Crystal Structure of A Functionally Unknown Protein RPA4178 From Rhodopseudomonas Palustris CGA009


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Crystal Structure of A Functionally Unknown Protein RPA4178 From Rhodopseudomonas Palustris CGA009 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca99

b:3.7
occ:0.50
OD2 B:ASP37 2.4 11.8 1.0
OE2 A:GLU15 2.4 11.9 1.0
O B:HOH327 2.4 10.9 1.0
OD2 A:ASP14 2.5 17.0 1.0
O B:HOH354 2.6 28.8 1.0
CD A:GLU15 3.4 11.1 1.0
CG A:ASP14 3.5 13.8 1.0
CG B:ASP37 3.6 9.8 1.0
OD1 A:ASP14 3.8 15.2 1.0
CG A:GLU15 3.9 10.4 1.0
O B:HOH137 4.1 9.5 1.0
OD1 B:ASP37 4.2 9.7 1.0
NZ B:LYS71 4.4 16.4 1.0
O2 B:FMT100 4.5 18.9 1.0
OE1 A:GLU15 4.5 12.5 1.0
O B:HOH110 4.6 9.5 1.0
CB B:ASP37 4.6 8.8 1.0
O A:HOH334 4.7 24.4 1.0
CB A:ASP14 4.8 13.4 1.0

Reference:

K.Tan, E.Evdokimova, M.Kudritska, A.Savchenko, A.Edwards, A.Joachimiak. The Crystal Structure of A Functionally Unknown Protein RPA4178 From Rhodopseudomonas Palustris CGA009 To Be Published.
Page generated: Tue Jul 8 14:09:25 2025

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