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Calcium in PDB 3lor: The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A

Protein crystallography data

The structure of The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A, PDB code: 3lor was solved by A.J.Stein, J.Osipiuk, A.Weger, G.Cobb, A.Joachimiak, Midwest Center Forstructural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.40 / 2.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 78.190, 78.892, 124.229, 90.00, 90.00, 90.00
R / Rfree (%) 21.2 / 25.9

Other elements in 3lor:

The structure of The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A also contains other interesting chemical elements:

Chlorine (Cl) 5 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A (pdb code 3lor). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A, PDB code: 3lor:

Calcium binding site 1 out of 1 in 3lor

Go back to Calcium Binding Sites List in 3lor
Calcium binding site 1 out of 1 in the The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca162

b:57.7
occ:1.00
OE1 B:GLU11 2.1 25.2 1.0
O B:LEU12 2.6 14.9 1.0
OD1 B:ASP13 2.6 19.9 1.0
CD B:GLU11 3.1 23.9 1.0
C B:LEU12 3.4 15.7 1.0
OE2 B:GLU11 3.5 26.3 1.0
CG B:ASP13 3.7 18.4 1.0
CA B:ASP13 3.8 16.2 1.0
N B:ASP13 3.9 15.6 1.0
CB B:ASP13 4.2 16.2 1.0
CH3 B:ACT163 4.2 64.5 1.0
N B:LEU12 4.3 16.3 1.0
CG B:GLU11 4.5 20.5 1.0
CA B:LEU12 4.5 15.6 1.0
OD2 B:ASP13 4.6 21.2 1.0
O B:ACT163 4.7 64.7 1.0
C B:GLU11 4.8 17.3 1.0
CB B:GLU11 4.9 18.6 1.0
C B:ACT163 5.0 64.9 1.0
C B:ASP13 5.0 15.8 1.0

Reference:

A.J.Stein, J.Osipiuk, A.Weger, G.Cobb, A.Joachimiak. The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A To Be Published.
Page generated: Tue Jul 8 14:21:36 2025

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