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Calcium in PDB 3pgs: PHE3GLY Mutant of Ecfadl

Protein crystallography data

The structure of PHE3GLY Mutant of Ecfadl, PDB code: 3pgs was solved by B.Van Den Berg, B.W.Lepore, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.78 / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 63.068, 147.513, 151.092, 90.00, 90.00, 90.00
R / Rfree (%) 16.7 / 19.2

Calcium Binding Sites:

The binding sites of Calcium atom in the PHE3GLY Mutant of Ecfadl (pdb code 3pgs). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the PHE3GLY Mutant of Ecfadl, PDB code: 3pgs:

Calcium binding site 1 out of 1 in 3pgs

Go back to Calcium Binding Sites List in 3pgs
Calcium binding site 1 out of 1 in the PHE3GLY Mutant of Ecfadl


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of PHE3GLY Mutant of Ecfadl within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca428

b:30.4
occ:1.00
NE2 A:HIS425 2.3 41.1 1.0
NE2 A:HIS423 2.4 46.1 1.0
CD2 A:HIS423 3.2 42.7 1.0
CD2 A:HIS425 3.2 44.6 1.0
CE1 A:HIS425 3.3 37.9 1.0
CE1 A:HIS423 3.5 48.2 1.0
CG A:HIS423 4.4 44.9 1.0
ND1 A:HIS425 4.4 42.8 1.0
CG A:HIS425 4.4 41.6 1.0
ND1 A:HIS423 4.5 51.4 1.0
O A:HOH539 4.6 43.3 1.0

Reference:

B.W.Lepore, M.Indic, H.Pham, E.M.Hearn, D.R.Patel, B.Van Den Berg. From the Cover: Ligand-Gated Diffusion Across the Bacterial Outer Membrane. Proc.Natl.Acad.Sci.Usa V. 108 10121 2011.
ISSN: ISSN 0027-8424
PubMed: 21593406
DOI: 10.1073/PNAS.1018532108
Page generated: Sat Jul 13 16:49:49 2024

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