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Calcium in PDB 3sny: Crystal Structure of A Mutant T82R of A Betagamma-Crystallin Domain From Clostridium Beijerinckii

Protein crystallography data

The structure of Crystal Structure of A Mutant T82R of A Betagamma-Crystallin Domain From Clostridium Beijerinckii, PDB code: 3sny was solved by S.S.Srivastava, R.Sankaranarayanan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.85
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 77.314, 77.314, 77.738, 90.00, 90.00, 90.00
R / Rfree (%) 18.6 / 22

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of A Mutant T82R of A Betagamma-Crystallin Domain From Clostridium Beijerinckii (pdb code 3sny). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of A Mutant T82R of A Betagamma-Crystallin Domain From Clostridium Beijerinckii, PDB code: 3sny:

Calcium binding site 1 out of 1 in 3sny

Go back to Calcium Binding Sites List in 3sny
Calcium binding site 1 out of 1 in the Crystal Structure of A Mutant T82R of A Betagamma-Crystallin Domain From Clostridium Beijerinckii


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of A Mutant T82R of A Betagamma-Crystallin Domain From Clostridium Beijerinckii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca97

b:28.3
occ:1.00
O A:GLU9 2.3 15.3 1.0
O A:HOH170 2.4 29.4 1.0
OD1 A:ASP79 2.4 13.8 1.0
OG1 A:THR41 2.4 14.7 1.0
O A:TRP39 2.6 14.6 1.0
O A:HOH174 2.7 35.1 1.0
O A:HOH123 2.7 24.9 1.0
CG A:ASP79 3.3 14.5 1.0
OD2 A:ASP79 3.5 16.0 1.0
C A:GLU9 3.5 15.3 1.0
C A:TRP39 3.6 14.6 1.0
CB A:THR41 3.6 14.4 1.0
CA A:TRP39 4.3 14.7 1.0
N A:THR41 4.3 14.3 1.0
CA A:GLU9 4.4 15.2 1.0
OD1 A:ASN78 4.4 15.1 1.0
CG A:GLU9 4.4 16.6 1.0
O A:HOH153 4.4 43.0 1.0
C A:MET40 4.4 14.2 1.0
N A:ASP10 4.5 15.7 1.0
OD1 A:ASP10 4.5 18.6 1.0
CA A:THR41 4.5 14.5 1.0
N A:MET40 4.6 14.3 1.0
CG2 A:THR41 4.6 14.6 1.0
CA A:ASP10 4.7 16.0 1.0
CB A:ASP79 4.7 13.9 1.0
O A:MET40 4.8 13.9 1.0
CA A:MET40 4.9 14.1 1.0
CB A:GLU9 5.0 15.4 1.0

Reference:

A.Mishra, S.K.Suman, S.S.Srivastava, R.Sankaranarayanan, Y.Sharma. Decoding the Molecular Design Principles Underlying Ca(2+) Binding to Beta Gamma-Crystallin Motifs J.Mol.Biol. V. 415 75 2012.
ISSN: ISSN 0022-2836
PubMed: 22099475
DOI: 10.1016/J.JMB.2011.10.037
Page generated: Tue Jul 8 16:41:34 2025

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