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Calcium in PDB 4a3z: CPGH89CBM32-4 (Seleno-Methionine Labeled) Produced By Clostridium Perfringens

Enzymatic activity of CPGH89CBM32-4 (Seleno-Methionine Labeled) Produced By Clostridium Perfringens

All present enzymatic activity of CPGH89CBM32-4 (Seleno-Methionine Labeled) Produced By Clostridium Perfringens:
3.2.1.50;

Protein crystallography data

The structure of CPGH89CBM32-4 (Seleno-Methionine Labeled) Produced By Clostridium Perfringens, PDB code: 4a3z was solved by E.Ficko-Blean, C.P.Stuart, M.D.Suits, M.Cid, M.Tessier, R.J.Woods, A.B.Boraston, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.55
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 53.190, 53.190, 110.550, 90.00, 90.00, 90.00
R / Rfree (%) 12.781 / 17.333

Calcium Binding Sites:

The binding sites of Calcium atom in the CPGH89CBM32-4 (Seleno-Methionine Labeled) Produced By Clostridium Perfringens (pdb code 4a3z). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the CPGH89CBM32-4 (Seleno-Methionine Labeled) Produced By Clostridium Perfringens, PDB code: 4a3z:

Calcium binding site 1 out of 1 in 4a3z

Go back to Calcium Binding Sites List in 4a3z
Calcium binding site 1 out of 1 in the CPGH89CBM32-4 (Seleno-Methionine Labeled) Produced By Clostridium Perfringens


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of CPGH89CBM32-4 (Seleno-Methionine Labeled) Produced By Clostridium Perfringens within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca2344

b:6.3
occ:1.00
O A:ASN1230 2.3 5.4 1.0
O A:ASP1235 2.3 6.9 1.0
O A:ALA1337 2.3 5.2 1.0
OE1 A:GLU1338 2.4 5.2 1.0
OG A:SER1238 2.5 7.5 1.0
OD1 A:ASP1233 2.5 6.8 1.0
O A:SER1238 2.6 6.0 1.0
C A:ASN1230 3.5 4.4 1.0
C A:ASP1235 3.5 7.4 1.0
C A:SER1238 3.5 6.5 1.0
CG A:ASP1233 3.5 5.9 1.0
C A:ALA1337 3.5 4.8 1.0
CD A:GLU1338 3.6 6.3 1.0
CB A:SER1238 3.7 7.5 1.0
OD2 A:ASP1233 3.9 9.6 1.0
CA A:SER1238 3.9 6.3 1.0
N A:SER1238 4.0 6.7 1.0
N A:ASP1235 4.0 7.6 1.0
CA A:ASP1235 4.2 8.1 1.0
CA A:ASN1230 4.2 5.3 1.0
CB A:ASP1235 4.3 8.2 1.0
CB A:GLU1338 4.3 5.1 1.0
CB A:ASN1230 4.3 5.5 1.0
OE2 A:GLU1338 4.4 7.3 1.0
CA A:GLU1338 4.4 4.8 1.0
N A:GLU1338 4.4 4.7 1.0
CA A:ALA1337 4.5 4.8 1.0
N A:ILE1231 4.5 4.8 1.0
N A:LEU1236 4.5 7.8 1.0
CG A:GLU1338 4.5 5.6 1.0
CA A:ILE1231 4.6 4.2 1.0
N A:ASP1233 4.6 6.1 1.0
N A:LEU1239 4.6 6.4 1.0
C A:ILE1231 4.7 5.1 1.0
CA A:LEU1236 4.7 7.5 1.0
CB A:ASP1233 4.8 6.6 1.0
O A:ILE1231 4.9 5.1 1.0
C A:LEU1236 4.9 7.8 1.0
N A:GLY1234 4.9 6.6 1.0

Reference:

E.Ficko-Blean, C.P.Stuart, M.D.Suits, M.Cid, M.Tessier, R.J.Woods, A.B.Boraston. Carbohydrate Recognition By An Architecturally Complex Alpha-N-Acetylglucosaminidase From Clostridium Perfringens. Plos One V. 7 33524 2012.
ISSN: ISSN 1932-6203
PubMed: 22479408
DOI: 10.1371/JOURNAL.PONE.0033524
Page generated: Tue Jul 8 18:23:42 2025

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