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Calcium in PDB 4ce8: Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium

Protein crystallography data

The structure of Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium, PDB code: 4ce8 was solved by M.G.Cuypers, E.P.Mitchell, E.Mossou, M.Pokorna, M.Wimmerova, A.Imberty, M.Moulin, M.Haertlein, V.T.Forsyth, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.463 / 0.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 52.480, 72.490, 54.610, 90.00, 94.10, 90.00
R / Rfree (%) 12.47 / 14.05

Calcium Binding Sites:

The binding sites of Calcium atom in the Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium (pdb code 4ce8). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 8 binding sites of Calcium where determined in the Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium, PDB code: 4ce8:
Jump to Calcium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Calcium binding site 1 out of 8 in 4ce8

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Calcium binding site 1 out of 8 in the Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca997

b:4.0
occ:1.00
OD1 A:ASP99 2.4 6.0 1.0
OD1 A:ASP101 2.4 4.8 1.0
OE2 A:GLU95 2.4 4.6 1.0
OD2 A:ASP104 2.4 4.3 1.0
OE1 A:GLU95 2.5 4.5 1.0
O3 A:FUC999 2.5 4.5 1.0
O2 A:FUC999 2.5 5.4 1.0
OD1 A:ASP104 2.6 4.0 1.0
CD A:GLU95 2.8 4.6 1.0
CG A:ASP104 2.9 3.8 1.0
C2 A:FUC999 3.3 5.3 1.0
C3 A:FUC999 3.4 4.7 1.0
CG A:ASP99 3.4 6.0 1.0
D A:ASP101 3.4 6.7 1.0
CG A:ASP101 3.4 5.1 1.0
H2 A:FUC999 3.4 6.3 1.0
H3 A:FUC999 3.7 5.6 1.0
OD2 A:ASP99 3.7 6.2 1.0
CA A:CA998 3.7 3.8 1.0
D A:TYR102 3.8 5.3 1.0
D A:ASP96 3.8 5.5 1.0
DA A:GLU95 3.9 4.6 1.0
OD2 A:ASP101 4.0 4.8 1.0
D A:ASN100 4.0 8.1 1.0
D A:GLY97 4.0 6.8 1.0
D A:ASP99 4.1 7.7 1.0
O A:HOH3246 4.1 13.2 1.0
N A:ASP101 4.1 5.5 1.0
OD1 A:ASP96 4.3 4.4 0.6
CG A:GLU95 4.3 4.8 1.0
CB A:ASP104 4.4 3.9 1.0
N A:TYR102 4.4 4.4 1.0
D A:ASN103 4.4 4.7 1.0
N A:ASN100 4.5 6.7 1.0
DA3 A:GLY97 4.5 8.1 1.0
N A:ASP96 4.5 4.5 1.0
CB A:ASP101 4.6 5.8 1.0
N A:GLY97 4.6 5.7 1.0
DG3 A:GLU95 4.6 5.8 1.0
D A:ASP104 4.7 4.4 1.0
C4 A:FUC999 4.7 5.4 1.0
CA A:GLU95 4.7 3.9 1.0
CA A:ASP101 4.7 5.5 1.0
CB A:ASP99 4.7 6.4 1.0
C1 A:FUC999 4.7 6.3 1.0
DB2 A:ASP104 4.7 4.7 1.0
OD1 A:ASN103 4.7 4.2 1.0
N A:ASP99 4.7 6.4 1.0
DG2 A:GLU95 4.8 5.8 1.0
O4 A:FUC999 4.8 4.9 1.0
DA A:ASN100 4.8 8.2 1.0
DB3 A:ASP104 4.8 4.7 1.0
DB3 A:ASP101 4.9 6.9 1.0
CB A:GLU95 4.9 4.6 1.0
CG A:ASP96 5.0 4.6 0.8
DB2 A:GLU95 5.0 5.5 1.0
D A:THR98 5.0 9.1 1.0
CA A:GLY97 5.0 6.7 1.0
C A:ASP101 5.0 4.9 1.0

Calcium binding site 2 out of 8 in 4ce8

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Calcium binding site 2 out of 8 in the Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca998

b:3.8
occ:1.00
OD1 A:ASN103 2.3 4.2 1.0
OD1 A:ASP104 2.4 4.0 1.0
O A:ASN21 2.4 4.2 1.0
OD2 A:ASP101 2.4 4.8 1.0
O B:GLY114 2.4 5.1 1.0
O3 A:FUC999 2.5 4.5 1.0
O4 A:FUC999 2.5 4.9 1.0
OD1 A:ASP101 3.0 4.8 1.0
CG A:ASP101 3.1 5.1 1.0
H2 A:FUC999 3.2 6.3 1.0
DDD2 A:ASN103 3.4 5.9 1.0
C3 A:FUC999 3.4 4.7 1.0
CG A:ASN103 3.4 4.0 1.0
C B:GLY114 3.4 5.8 1.0
C4 A:FUC999 3.4 5.4 1.0
DA A:ASP104 3.5 4.4 1.0
C A:ASN21 3.6 3.7 1.0
CG A:ASP104 3.6 3.8 1.0
DB3 A:ASN21 3.6 5.1 1.0
OXT B:GLY114 3.7 7.4 1.0
CA A:CA997 3.7 4.0 1.0
H4 A:FUC999 3.7 6.5 1.0
ND2 A:ASN103 3.8 4.9 1.0
C2 A:FUC999 3.8 5.3 1.0
DA A:SER22 3.8 5.8 1.0
DB2 A:ASN21 3.8 5.1 1.0
DB2 A:SER22 4.0 6.2 1.0
CB A:ASN21 4.1 4.3 1.0
D A:ASN103 4.2 4.7 1.0
CA A:ASP104 4.2 3.6 1.0
N A:ASP104 4.3 3.6 1.0
H3 A:FUC999 4.3 5.6 1.0
CA A:SER22 4.4 4.8 1.0
O2 A:FUC999 4.4 5.4 1.0
N A:SER22 4.4 4.5 1.0
OD2 A:ASP104 4.4 4.3 1.0
C A:ASN103 4.5 3.5 1.0
CB A:ASP104 4.5 3.9 1.0
OD2 A:ASP99 4.5 6.2 1.0
CA A:ASN21 4.5 3.9 1.0
CB A:ASP101 4.5 5.8 1.0
D A:ASP104 4.6 4.4 1.0
O A:HOH2115 4.6 9.2 0.9
DDD1 A:ASN103 4.6 5.9 1.0
CB A:SER22 4.7 5.2 1.0
DB2 A:ASP101 4.7 6.9 1.0
CB A:ASN103 4.7 3.8 1.0
CA B:GLY114 4.8 5.5 1.0
C5 A:FUC999 4.8 6.4 1.0
O A:ASN103 4.8 3.8 1.0
DB3 A:ASP104 4.8 4.7 1.0
N A:ASN103 4.9 3.9 1.0
CA A:ASN103 4.9 3.8 1.0
DB3 A:ASP101 4.9 6.9 1.0
OD1 A:ASP99 5.0 6.0 1.0

Calcium binding site 3 out of 8 in 4ce8

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Calcium binding site 3 out of 8 in the Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca997

b:5.9
occ:1.00
OD1 B:ASP101 2.4 6.8 1.0
OD1 B:ASP99 2.4 9.2 1.0
OD2 B:ASP104 2.4 5.7 1.0
OE2 B:GLU95 2.4 6.5 1.0
OE1 B:GLU95 2.5 6.3 1.0
O3 B:FUC999 2.5 6.3 1.0
O2 B:FUC999 2.5 7.0 1.0
OD1 B:ASP104 2.6 5.3 1.0
CD B:GLU95 2.8 6.2 1.0
CG B:ASP104 2.9 4.7 1.0
C2 B:FUC999 3.3 7.1 1.0
C3 B:FUC999 3.4 6.8 1.0
D B:ASP101 3.4 9.8 1.0
CG B:ASP99 3.4 9.2 1.0
CG B:ASP101 3.4 6.9 1.0
H2 B:FUC999 3.4 8.6 1.0
H3 B:FUC999 3.7 8.2 1.0
OD2 B:ASP99 3.7 9.5 1.0
CA B:CA998 3.8 5.0 1.0
D B:ASP96 3.8 7.2 1.0
D B:TYR102 3.8 7.5 1.0
DA B:GLU95 3.9 6.8 1.0
OD2 B:ASP101 4.0 7.0 1.0
D B:GLY97 4.1 9.8 1.0
O B:HOH2120 4.1 11.6 0.7
D B:ASP99 4.1 13.1 1.0
N B:ASP101 4.1 8.2 1.0
D B:ASN100 4.1 11.4 1.0
OD1 B:ASP96 4.2 8.1 1.0
CG B:GLU95 4.3 6.7 1.0
CB B:ASP104 4.4 4.6 1.0
N B:TYR102 4.4 6.2 1.0
D B:ASN103 4.4 6.0 1.0
N B:ASN100 4.5 9.5 1.0
N B:ASP96 4.5 6.0 1.0
CB B:ASP101 4.5 7.8 1.0
DA3 B:GLY97 4.6 11.4 1.0
N B:GLY97 4.6 8.2 1.0
DG3 B:GLU95 4.6 8.0 1.0
D B:ASP104 4.7 5.0 1.0
C4 B:FUC999 4.7 6.7 1.0
CA B:ASP101 4.7 8.0 1.0
DB2 B:ASP104 4.7 5.5 1.0
CA B:GLU95 4.7 5.7 1.0
C1 B:FUC999 4.7 8.2 1.0
CB B:ASP99 4.7 10.7 1.0
N B:ASP99 4.8 10.9 1.0
OD1 B:ASN103 4.8 4.8 1.0
DG2 B:GLU95 4.8 8.0 1.0
O4 B:FUC999 4.8 6.5 1.0
DB3 B:ASP101 4.8 9.4 1.0
DB3 B:ASP104 4.8 5.5 1.0
DA B:ASN100 4.9 12.3 1.0
CB B:GLU95 4.9 6.2 1.0
CG B:ASP96 4.9 6.8 1.0
DB2 B:GLU95 4.9 7.4 1.0
C B:ASP101 5.0 7.2 1.0

Calcium binding site 4 out of 8 in 4ce8

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Calcium binding site 4 out of 8 in the Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca998

b:5.0
occ:1.00
OD1 B:ASN103 2.3 4.8 1.0
O B:ASN21 2.4 4.9 1.0
OD1 B:ASP104 2.4 5.3 1.0
OD2 B:ASP101 2.4 7.0 1.0
O A:GLY114 2.4 6.2 1.0
O4 B:FUC999 2.5 6.5 1.0
O3 B:FUC999 2.5 6.3 1.0
OD1 B:ASP101 3.0 6.8 1.0
CG B:ASP101 3.1 6.9 1.0
H2 B:FUC999 3.2 8.6 1.0
CG B:ASN103 3.4 4.9 1.0
DDD2 B:ASN103 3.4 7.4 1.0
C3 B:FUC999 3.4 6.8 1.0
C A:GLY114 3.4 6.6 1.0
C4 B:FUC999 3.4 6.7 1.0
DA B:ASP104 3.5 5.1 1.0
C B:ASN21 3.5 4.3 1.0
CG B:ASP104 3.6 4.7 1.0
DB3 B:ASN21 3.7 5.7 1.0
OXT A:GLY114 3.7 8.6 1.0
DA B:SER22 3.7 6.3 1.0
CA B:CA997 3.8 5.9 1.0
H4 B:FUC999 3.8 8.1 1.0
ND2 B:ASN103 3.8 6.2 1.0
C2 B:FUC999 3.8 7.1 1.0
DB2 B:ASN21 3.9 5.7 1.0
DB2 B:SER22 3.9 6.8 1.0
D B:ASN103 4.2 6.0 1.0
CB B:ASN21 4.2 4.7 1.0
CA B:ASP104 4.2 4.2 1.0
N B:ASP104 4.3 4.1 1.0
CA B:SER22 4.4 5.3 1.0
H3 B:FUC999 4.4 8.2 1.0
N B:SER22 4.4 4.8 1.0
C B:ASN103 4.4 4.2 1.0
O A:HOH2220 4.4 12.8 0.7
OD2 B:ASP104 4.5 5.7 1.0
O2 B:FUC999 4.5 7.0 1.0
CB B:ASP104 4.5 4.6 1.0
D B:ASP104 4.5 5.0 1.0
OD2 B:ASP99 4.5 9.5 1.0
CA B:ASN21 4.5 4.5 1.0
CB B:ASP101 4.5 7.8 1.0
CB B:SER22 4.6 5.6 1.0
DDD1 B:ASN103 4.6 7.4 1.0
CB B:ASN103 4.7 5.1 1.0
DB2 B:ASP101 4.7 9.4 1.0
O B:ASN103 4.8 4.6 1.0
C5 B:FUC999 4.8 7.6 1.0
CA A:GLY114 4.8 7.5 1.0
DB3 B:ASP104 4.8 5.5 1.0
N B:ASN103 4.8 5.0 1.0
CA B:ASN103 4.9 4.6 1.0
DB3 B:ASP101 4.9 9.4 1.0
H63 B:FUC999 5.0 11.0 1.0

Calcium binding site 5 out of 8 in 4ce8

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Calcium binding site 5 out of 8 in the Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 5 of Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca997

b:4.6
occ:1.00
OD1 C:ASP99 2.3 7.0 1.0
OD1 C:ASP101 2.4 5.4 1.0
OE2 C:GLU95 2.4 5.3 1.0
OD2 C:ASP104 2.4 5.0 1.0
OE1 C:GLU95 2.5 4.6 1.0
O3 C:FUC999 2.5 5.2 1.0
O2 C:FUC999 2.5 6.1 1.0
OD1 C:ASP104 2.6 4.5 1.0
CD C:GLU95 2.8 4.5 1.0
CG C:ASP104 2.9 4.3 1.0
C2 C:FUC999 3.3 6.2 1.0
CG C:ASP99 3.4 6.7 1.0
D C:ASP101 3.4 6.4 1.0
C3 C:FUC999 3.4 6.2 1.0
H2 C:FUC999 3.4 7.5 1.0
CG C:ASP101 3.4 5.0 1.0
OD2 C:ASP99 3.7 7.6 1.0
H3 C:FUC999 3.7 7.5 1.0
CA C:CA998 3.7 4.3 1.0
D C:TYR102 3.8 5.6 1.0
D C:ASP96 3.8 5.8 1.0
DA C:GLU95 3.9 5.2 1.0
OD2 C:ASP101 4.0 5.3 1.0
D C:GLY97 4.0 7.5 1.0
D C:ASN100 4.1 7.2 1.0
D C:ASP99 4.1 8.9 1.0
O C:HOH2104 4.1 10.1 0.8
N C:ASP101 4.1 5.3 1.0
OD1 C:ASP96 4.2 7.7 1.0
CG C:GLU95 4.3 4.8 1.0
CB C:ASP104 4.4 4.6 1.0
D C:ASN103 4.4 4.9 1.0
N C:TYR102 4.5 4.7 1.0
N C:ASN100 4.5 6.0 1.0
N C:ASP96 4.5 4.8 1.0
CB C:ASP101 4.6 5.9 1.0
DG3 C:GLU95 4.6 5.8 1.0
N C:GLY97 4.6 6.3 1.0
DA3 C:GLY97 4.6 9.1 1.0
DB2 C:ASP104 4.7 5.5 1.0
D C:ASP104 4.7 4.5 1.0
C4 C:FUC999 4.7 6.2 1.0
CA C:ASP101 4.7 5.4 1.0
CB C:ASP99 4.7 7.8 1.0
CA C:GLU95 4.7 4.3 1.0
C1 C:FUC999 4.7 7.7 1.0
OD1 C:ASN103 4.7 4.3 1.0
N C:ASP99 4.7 7.4 1.0
DG2 C:GLU95 4.8 5.8 1.0
O4 C:FUC999 4.8 5.7 1.0
DB3 C:ASP104 4.8 5.5 1.0
DA C:ASN100 4.8 7.0 1.0
DB3 C:ASP101 4.9 7.0 1.0
CB C:GLU95 4.9 4.8 1.0
CG C:ASP96 5.0 5.9 1.0
DB2 C:GLU95 5.0 5.7 1.0
C C:ASP99 5.0 6.5 1.0

Calcium binding site 6 out of 8 in 4ce8

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Calcium binding site 6 out of 8 in the Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 6 of Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca998

b:4.3
occ:1.00
OD1 C:ASN103 2.3 4.3 1.0
OD1 C:ASP104 2.4 4.5 1.0
O C:ASN21 2.4 4.7 1.0
OD2 C:ASP101 2.4 5.3 1.0
O D:GLY114 2.4 5.8 1.0
O4 C:FUC999 2.5 5.7 1.0
O3 C:FUC999 2.5 5.2 1.0
OD1 C:ASP101 3.0 5.4 1.0
CG C:ASP101 3.1 5.0 1.0
H2 C:FUC999 3.2 7.5 1.0
DDD2 C:ASN103 3.4 7.1 1.0
CG C:ASN103 3.4 4.5 1.0
C3 C:FUC999 3.4 6.2 1.0
C4 C:FUC999 3.4 6.2 1.0
C D:GLY114 3.4 6.4 1.0
DA C:ASP104 3.5 4.9 1.0
C C:ASN21 3.5 4.4 1.0
CG C:ASP104 3.6 4.3 1.0
DB3 C:ASN21 3.7 5.5 1.0
OXT D:GLY114 3.7 8.2 1.0
CA C:CA997 3.7 4.6 1.0
H4 C:FUC999 3.8 7.4 1.0
ND2 C:ASN103 3.8 5.9 1.0
DA C:SER22 3.8 6.4 1.0
C2 C:FUC999 3.8 6.2 1.0
DB2 C:ASN21 3.8 5.5 1.0
DB2 C:SER22 4.0 7.4 1.0
CB C:ASN21 4.1 4.5 1.0
D C:ASN103 4.2 4.9 1.0
CA C:ASP104 4.2 4.1 1.0
N C:ASP104 4.3 3.8 1.0
H3 C:FUC999 4.4 7.5 1.0
O C:HOH2197 4.4 8.2 0.6
CA C:SER22 4.4 5.3 1.0
N C:SER22 4.4 4.9 1.0
O2 C:FUC999 4.4 6.1 1.0
OD2 C:ASP104 4.5 5.0 1.0
C C:ASN103 4.5 3.8 1.0
CB C:ASP104 4.5 4.6 1.0
CB C:ASP101 4.5 5.9 1.0
CA C:ASN21 4.5 4.2 1.0
OD2 C:ASP99 4.5 7.6 1.0
D C:ASP104 4.6 4.5 1.0
DDD1 C:ASN103 4.6 7.1 1.0
CB C:SER22 4.7 6.2 1.0
DB2 C:ASP101 4.7 7.0 1.0
CB C:ASN103 4.7 4.3 1.0
C5 C:FUC999 4.8 8.1 1.0
O C:ASN103 4.8 4.0 1.0
DB3 C:ASP104 4.8 5.5 1.0
CA D:GLY114 4.8 6.5 1.0
N C:ASN103 4.9 4.1 1.0
DB3 C:ASP101 4.9 7.0 1.0
CA C:ASN103 4.9 4.0 1.0
H61 C:FUC999 5.0 10.6 1.0

Calcium binding site 7 out of 8 in 4ce8

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Calcium binding site 7 out of 8 in the Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 7 of Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ca997

b:4.6
occ:1.00
OD1 D:ASP99 2.4 7.0 1.0
OD1 D:ASP101 2.4 5.3 1.0
OE2 D:GLU95 2.4 5.6 1.0
OD2 D:ASP104 2.4 4.8 1.0
O3 D:FUC999 2.5 4.8 1.0
OE1 D:GLU95 2.5 5.2 1.0
O2 D:FUC999 2.5 5.5 1.0
OD1 D:ASP104 2.6 4.3 1.0
CD D:GLU95 2.8 4.8 1.0
CG D:ASP104 2.9 3.9 1.0
C2 D:FUC999 3.3 5.6 1.0
D D:ASP101 3.4 7.8 1.0
C3 D:FUC999 3.4 5.4 1.0
CG D:ASP99 3.4 7.0 1.0
CG D:ASP101 3.4 5.1 1.0
H2 D:FUC999 3.4 6.8 1.0
H3 D:FUC999 3.7 6.5 1.0
OD2 D:ASP99 3.7 8.0 1.0
CA D:CA998 3.7 4.0 1.0
D D:TYR102 3.8 6.1 1.0
D D:ASP96 3.8 6.1 1.0
DA D:GLU95 3.9 5.9 1.0
OD2 D:ASP101 4.0 5.3 1.0
D D:ASP99 4.1 10.4 1.0
D D:GLY97 4.1 8.7 1.0
D D:ASN100 4.1 9.7 1.0
O D:HOH2154 4.1 13.4 0.9
N D:ASP101 4.1 6.5 1.0
OD1 D:ASP96 4.2 6.7 1.0
CG D:GLU95 4.3 5.6 1.0
CB D:ASP104 4.4 4.3 1.0
N D:TYR102 4.4 5.1 1.0
D D:ASN103 4.5 5.1 1.0
N D:ASN100 4.5 8.1 1.0
DA3 D:GLY97 4.5 10.3 1.0
N D:ASP96 4.5 5.1 1.0
CB D:ASP101 4.6 6.0 1.0
DG3 D:GLU95 4.6 6.7 1.0
N D:GLY97 4.6 7.2 1.0
C4 D:FUC999 4.7 5.2 1.0
CA D:ASP101 4.7 6.1 1.0
DB2 D:ASP104 4.7 5.2 1.0
CA D:GLU95 4.7 4.9 1.0
D D:ASP104 4.7 4.6 1.0
CB D:ASP99 4.7 8.8 1.0
C1 D:FUC999 4.7 6.3 1.0
N D:ASP99 4.7 8.7 1.0
OD1 D:ASN103 4.7 4.3 1.0
DG2 D:GLU95 4.8 6.7 1.0
O4 D:FUC999 4.8 4.9 1.0
DB3 D:ASP104 4.8 5.2 1.0
DA D:ASN100 4.9 9.5 1.0
DB3 D:ASP101 4.9 7.2 1.0
CB D:GLU95 4.9 5.4 1.0
DB2 D:GLU95 4.9 6.5 1.0
CG D:ASP96 4.9 5.6 1.0
D D:THR98 5.0 10.7 1.0
C D:ASP99 5.0 8.0 1.0
CA D:GLY97 5.0 8.6 1.0
C D:ASP101 5.0 5.5 1.0

Calcium binding site 8 out of 8 in 4ce8

Go back to Calcium Binding Sites List in 4ce8
Calcium binding site 8 out of 8 in the Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 8 of Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L-Fucose and Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ca998

b:4.0
occ:1.00
OD1 D:ASN103 2.3 4.3 1.0
OD1 D:ASP104 2.4 4.3 1.0
O D:ASN21 2.4 3.9 1.0
O C:GLY114 2.4 5.1 1.0
OD2 D:ASP101 2.4 5.3 1.0
O4 D:FUC999 2.5 4.9 1.0
O3 D:FUC999 2.5 4.8 1.0
OD1 D:ASP101 3.0 5.3 1.0
CG D:ASP101 3.1 5.1 1.0
H2 D:FUC999 3.2 6.8 1.0
DDD2 D:ASN103 3.4 6.6 1.0
CG D:ASN103 3.4 4.2 1.0
C3 D:FUC999 3.4 5.4 1.0
C C:GLY114 3.4 6.0 1.0
C4 D:FUC999 3.4 5.2 1.0
DA D:ASP104 3.5 4.7 1.0
C D:ASN21 3.6 3.8 1.0
CG D:ASP104 3.6 3.9 1.0
DB3 D:ASN21 3.6 5.0 1.0
OXT C:GLY114 3.7 8.1 1.0
CA D:CA997 3.7 4.6 1.0
H4 D:FUC999 3.7 6.3 1.0
ND2 D:ASN103 3.7 5.5 1.0
DA D:SER22 3.8 5.1 1.0
C2 D:FUC999 3.8 5.6 1.0
DB2 D:ASN21 3.8 5.0 1.0
DB2 D:SER22 4.0 5.9 1.0
CB D:ASN21 4.1 4.1 1.0
D D:ASN103 4.1 5.1 1.0
CA D:ASP104 4.2 3.9 1.0
N D:ASP104 4.3 3.9 1.0
H3 D:FUC999 4.4 6.5 1.0
O C:HOH2129 4.4 12.8 0.8
CA D:SER22 4.4 4.3 1.0
N D:SER22 4.4 4.1 1.0
O2 D:FUC999 4.4 5.5 1.0
OD2 D:ASP104 4.4 4.8 1.0
C D:ASN103 4.4 3.7 1.0
CB D:ASP104 4.5 4.3 1.0
CA D:ASN21 4.5 4.0 1.0
CB D:ASP101 4.5 6.0 1.0
D D:ASP104 4.5 4.6 1.0
OD2 D:ASP99 4.6 8.0 1.0
DDD1 D:ASN103 4.6 6.6 1.0
CB D:SER22 4.7 4.9 1.0
DB2 D:ASP101 4.7 7.2 1.0
CB D:ASN103 4.7 4.4 1.0
C5 D:FUC999 4.8 5.7 1.0
O D:ASN103 4.8 4.0 1.0
CA C:GLY114 4.8 6.2 1.0
DB3 D:ASP104 4.8 5.2 1.0
N D:ASN103 4.8 4.2 1.0
CA D:ASN103 4.9 4.1 1.0
DB3 D:ASP101 4.9 7.2 1.0
H63 D:FUC999 5.0 7.3 1.0
OD1 D:ASP99 5.0 7.0 1.0

Reference:

E.Mossou, M.G.Cuypers, E.P.Mitchell, S.Russi, M.Pokorna, M.Wimmerova, A.Imberty, S.Mcsweeney, M.Haertlein, V.T.Forsyth. Perdeuterated Pseudomonas Aeruginosa Lectin II Complex with Hydrogenated L Fucose and Calcium To Be Published.
Page generated: Sat Jul 13 23:03:32 2024

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