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Calcium in PDB 4coy: Crystal Structure of Epithelial Adhesin 6 A Domain (EPA6A) From Candida Glabrata in Complex with GALB1-4GLCNAC

Protein crystallography data

The structure of Crystal Structure of Epithelial Adhesin 6 A Domain (EPA6A) From Candida Glabrata in Complex with GALB1-4GLCNAC, PDB code: 4coy was solved by M.Kock, M.Maestre-Reyna, R.Diderrich, H.-U.Moesch, L.-O.Essen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.58 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 41.470, 63.330, 110.250, 90.00, 90.00, 90.00
R / Rfree (%) 18.668 / 22.317

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Epithelial Adhesin 6 A Domain (EPA6A) From Candida Glabrata in Complex with GALB1-4GLCNAC (pdb code 4coy). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Epithelial Adhesin 6 A Domain (EPA6A) From Candida Glabrata in Complex with GALB1-4GLCNAC, PDB code: 4coy:

Calcium binding site 1 out of 1 in 4coy

Go back to Calcium Binding Sites List in 4coy
Calcium binding site 1 out of 1 in the Crystal Structure of Epithelial Adhesin 6 A Domain (EPA6A) From Candida Glabrata in Complex with GALB1-4GLCNAC


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Epithelial Adhesin 6 A Domain (EPA6A) From Candida Glabrata in Complex with GALB1-4GLCNAC within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1270

b:8.2
occ:1.00
OD1 A:ASP164 2.2 8.6 1.0
O A:ASP227 2.3 9.2 1.0
O A:ASP229 2.3 9.4 1.0
OD1 A:ASN225 2.3 7.1 1.0
O3 A:GAL1271 2.3 10.1 1.0
O4 A:GAL1271 2.4 9.9 1.0
OD1 A:ASP165 2.4 7.8 1.0
CG A:ASP164 3.2 8.9 1.0
CG A:ASP165 3.3 7.9 1.0
C4 A:GAL1271 3.3 11.5 1.0
C3 A:GAL1271 3.3 11.1 1.0
CG A:ASN225 3.5 7.1 1.0
C A:ASP227 3.5 9.3 1.0
C A:ASP229 3.5 9.8 1.0
OD2 A:ASP164 3.6 9.4 1.0
OD2 A:ASP165 3.6 8.1 1.0
N A:ASP227 4.0 8.4 1.0
C2 A:GAL1271 4.1 12.3 1.0
N A:ASP229 4.1 10.4 1.0
ND2 A:ASN225 4.1 7.3 1.0
C A:ASN228 4.2 10.3 1.0
C A:ASP164 4.2 7.9 1.0
N A:ASP165 4.3 7.5 1.0
N A:ARG226 4.3 7.4 1.0
CA A:ASP227 4.3 8.9 1.0
O A:ASP164 4.3 7.8 1.0
CA A:ASP229 4.4 10.3 1.0
O A:ASN228 4.4 10.1 1.0
CB A:ASP165 4.5 7.6 1.0
CB A:ASP164 4.5 8.8 1.0
N A:ASN228 4.5 9.9 1.0
N A:GLY230 4.5 9.6 1.0
CB A:ASN225 4.6 6.9 1.0
CA A:ASN228 4.7 10.4 1.0
CA A:ASN225 4.7 6.8 1.0
CG A:ARG226 4.7 8.1 1.0
C5 A:GAL1271 4.7 12.8 1.0
CB A:ASN228 4.7 10.8 1.0
CA A:ASP165 4.7 7.7 1.0
CA A:GLY230 4.7 9.2 1.0
CA A:ASP164 4.8 8.3 1.0
C A:ASN225 4.9 7.1 1.0
O2 A:GAL1271 4.9 10.8 1.0
CB A:ASP227 4.9 9.1 1.0
C A:ARG226 5.0 8.1 1.0
CB A:ASP229 5.0 10.9 1.0

Reference:

R.Diderrich, M.Kock, M.Maestre-Reyna, S.Rupp, L.-O.Essen, H.-U.Moesch. The Structure and Function of the Epithelial Adhesins To Be Published.
Page generated: Tue Jul 8 19:15:13 2025

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