Calcium in PDB 4gdi: A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009

The structure of A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009, PDB code: 4gdi was solved by X.Zhu, I.A.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.11 / 1.95
Space group	I 4
Cell size a, b, c (Å), α, β, γ (°)	176.324, 176.324, 193.313, 90.00, 90.00, 90.00
R / Rfree (%)	18 / 22.3

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 11;

Binding sites:

The binding sites of Calcium atom in the A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009 (pdb code 4gdi). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 11 binding sites of Calcium where determined in the A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009, PDB code: 4gdi:
Jump to Calcium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Calcium binding site 1 out of 11 in the A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca509 b:25.5 occ:1.00 OD2 A:ASP324 2.3 23.3 1.0 O A:ASN293 2.3 27.4 1.0 O A:ASP297 2.3 31.2 1.0 O A:GLY347 2.3 28.4 1.0 O A:HOH834 2.4 26.3 1.0 O A:GLY345 2.5 34.0 1.0 HA A:ALA298 3.3 28.7 1.0 CG A:ASP324 3.4 24.7 1.0 C A:GLY345 3.4 37.1 1.0 C A:ASP297 3.5 26.1 1.0 C A:ASN293 3.5 25.9 1.0 HA3 A:GLY348 3.5 36.1 1.0 HA2 A:GLY345 3.5 42.7 1.0 C A:GLY347 3.6 29.9 1.0 HA A:LEU294 3.6 31.1 1.0 H A:ASP297 3.7 31.8 1.0 O A:HOH615 3.9 22.3 1.0 HB3 A:ASP324 3.9 31.6 1.0 HB3 A:ASN293 4.0 24.6 1.0 CA A:GLY345 4.0 35.6 1.0 HA2 A:GLY348 4.1 36.1 1.0 CB A:ASP324 4.1 26.4 1.0 CA A:GLY348 4.2 30.1 1.0 CA A:ALA298 4.2 23.9 1.0 N A:ALA298 4.2 25.6 1.0 HB2 A:ASP324 4.3 31.6 1.0 H A:ASN293 4.3 27.9 1.0 CA A:LEU294 4.3 25.9 1.0 N A:GLY348 4.3 24.8 1.0 OD1 A:ASP324 4.3 24.2 1.0 C A:GLU346 4.3 34.0 1.0 N A:LEU294 4.3 25.8 1.0 N A:ASP297 4.4 26.6 1.0 O A:GLU346 4.4 33.4 1.0 HD23 A:LEU294 4.4 31.2 1.0 N A:GLY347 4.5 29.0 1.0 N A:GLU346 4.5 34.5 1.0 CA A:ASN293 4.5 21.4 1.0 HA3 A:GLY345 4.5 42.7 1.0 CA A:ASP297 4.5 26.0 1.0 N A:ASN293 4.6 23.2 1.0 HG23 A:THR292 4.6 26.7 1.0 CA A:GLY347 4.6 27.2 1.0 HD2 A:PRO326 4.6 35.1 1.0 HA A:GLU346 4.6 37.3 1.0 CB A:ASN293 4.7 20.5 1.0 O A:LYS344 4.7 34.2 1.0 C A:LEU294 4.7 28.4 1.0 HB2 A:ALA298 4.8 43.3 1.0 CA A:GLU346 4.8 31.1 1.0 HG22 A:THR292 4.8 26.7 1.0 H A:GLY347 4.8 34.7 1.0 HB3 A:ASP297 4.8 30.6 1.0 O A:PRO326 4.9 29.2 1.0 H A:TRP295 4.9 33.5 1.0

Calcium binding site 2 out of 11 in the A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009 within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca509 b:25.1 occ:1.00 OD2 B:ASP324 2.3 20.9 1.0 O B:ASN293 2.3 23.5 1.0 O B:ASP297 2.3 26.5 1.0 O B:GLY347 2.3 24.6 1.0 O B:GLY345 2.4 32.0 1.0 O B:HOH730 2.4 26.0 1.0 HA B:ALA298 3.4 33.6 1.0 C B:GLY345 3.5 35.3 1.0 CG B:ASP324 3.5 26.1 1.0 C B:ASP297 3.5 31.5 1.0 C B:ASN293 3.5 28.9 1.0 C B:GLY347 3.5 29.6 1.0 HA B:LEU294 3.6 25.2 1.0 HA2 B:GLY345 3.6 33.5 1.0 HA3 B:GLY348 3.7 31.9 1.0 H B:ASP297 3.7 33.4 1.0 HA2 B:GLY348 3.9 31.9 1.0 HB3 B:ASP324 4.0 25.6 1.0 O B:HOH613 4.0 25.7 1.0 HB3 B:ASN293 4.1 25.5 1.0 CA B:GLY345 4.1 27.9 1.0 CA B:GLY348 4.1 26.6 1.0 CB B:ASP324 4.2 21.3 1.0 CA B:ALA298 4.2 28.1 1.0 N B:ALA298 4.3 25.4 1.0 N B:GLY348 4.3 26.0 1.0 CA B:LEU294 4.3 21.1 1.0 HB2 B:ASP324 4.3 25.6 1.0 C B:GLU346 4.3 33.7 1.0 H B:ASN293 4.4 24.5 1.0 N B:GLY347 4.4 27.3 1.0 N B:LEU294 4.4 22.6 1.0 OD1 B:ASP324 4.4 25.2 1.0 N B:ASP297 4.4 27.9 1.0 N B:GLU346 4.5 33.9 1.0 CA B:ASN293 4.5 21.1 1.0 HD23 B:LEU294 4.5 30.0 1.0 CA B:ASP297 4.5 26.1 1.0 O B:GLU346 4.6 34.4 1.0 HG22 B:THR292 4.6 29.3 1.0 CA B:GLY347 4.6 28.7 1.0 H B:GLY347 4.6 32.7 1.0 O B:LYS344 4.6 25.9 1.0 HA3 B:GLY345 4.6 33.5 1.0 HA B:GLU346 4.6 42.3 1.0 N B:ASN293 4.7 20.4 1.0 C B:LEU294 4.7 28.2 1.0 HG23 B:THR292 4.7 29.3 1.0 HD2 B:PRO326 4.7 44.7 1.0 CB B:ASN293 4.7 21.2 1.0 CA B:GLU346 4.8 35.3 1.0 HB3 B:ASP297 4.8 34.5 1.0 O B:PRO326 4.9 30.1 1.0 HB2 B:ALA298 4.9 36.9 1.0 H B:TRP295 4.9 42.3 1.0

Calcium binding site 3 out of 11 in the A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009 within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca510 b:59.7 occ:1.00 O B:HOH838 2.2 53.8 1.0 O B:HOH707 2.3 36.0 1.0 OD1 B:ASP213 2.3 27.6 1.0 O B:HOH836 2.3 37.0 1.0 O B:HOH837 2.4 40.0 1.0 O B:HOH835 2.4 38.1 1.0 CG B:ASP213 3.1 25.7 1.0 OD2 B:ASP213 3.3 32.9 1.0 HG A:SER451 3.7 65.5 1.0 H B:THR214 3.9 24.2 1.0 O B:THR214 3.9 31.2 1.0 O1 B:NO3516 4.3 35.1 1.0 OG A:SER451 4.4 54.6 1.0 HA B:ASP213 4.4 25.4 1.0 CB B:ASP213 4.6 25.2 1.0 N B:THR214 4.7 20.2 1.0 HB B:VAL262 4.8 31.9 1.0 O B:HOH726 4.9 38.9 1.0 CA B:ASP213 5.0 21.2 1.0 HG23 B:THR261 5.0 35.0 1.0

Calcium binding site 4 out of 11 in the A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009 within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca507 b:48.5 occ:1.00 O C:GLY347 2.3 45.3 1.0 O C:ASN293 2.3 38.4 1.0 OD2 C:ASP324 2.3 39.6 1.0 O C:ASP297 2.4 49.7 1.0 O C:GLY345 2.6 57.0 1.0 HA C:ALA298 3.4 53.6 1.0 HA3 C:GLY348 3.4 50.4 1.0 CG C:ASP324 3.5 44.3 1.0 C C:ASP297 3.5 54.5 1.0 C C:GLY347 3.5 44.6 1.0 C C:ASN293 3.5 32.8 1.0 HA2 C:GLY345 3.6 60.8 1.0 C C:GLY345 3.6 49.3 1.0 HA C:LEU294 3.6 54.5 1.0 H C:ASP297 3.7 64.6 1.0 O C:HOH610 3.9 37.3 1.0 HA2 C:GLY348 4.0 50.4 1.0 HB3 C:ASN293 4.0 41.8 1.0 CA C:GLY348 4.0 42.0 1.0 HB3 C:ASP324 4.0 44.2 1.0 CA C:GLY345 4.1 50.7 1.0 CA C:ALA298 4.2 44.7 1.0 N C:GLY348 4.2 43.3 1.0 N C:ALA298 4.2 43.2 1.0 CB C:ASP324 4.3 36.9 1.0 OD1 C:ASP324 4.3 46.2 1.0 O C:GLU346 4.3 47.6 1.0 H C:ASN293 4.3 51.9 1.0 CA C:LEU294 4.3 45.4 1.0 N C:LEU294 4.4 36.1 1.0 HB2 C:ASP324 4.4 44.2 1.0 C C:GLU346 4.4 50.9 1.0 HD23 C:LEU294 4.4 50.1 1.0 N C:ASP297 4.4 53.9 1.0 CA C:ASN293 4.5 35.3 1.0 CA C:ASP297 4.5 42.8 1.0 N C:GLY347 4.6 53.7 1.0 HG23 C:THR292 4.6 42.7 1.0 HA3 C:GLY345 4.6 60.8 1.0 CA C:GLY347 4.6 42.5 1.0 N C:ASN293 4.7 43.3 1.0 N C:GLU346 4.7 49.3 1.0 CB C:ASN293 4.7 34.9 1.0 O C:LYS344 4.7 70.6 1.0 C C:LEU294 4.8 52.7 1.0 HD2 C:PRO326 4.8 70.1 1.0 H C:TRP295 4.8 61.1 1.0 HB3 C:ASP297 4.8 48.5 1.0 HG22 C:THR292 4.8 42.7 1.0 O C:PRO326 4.9 61.0 1.0 H C:GLY347 4.9 64.5 1.0 HA C:GLU346 5.0 65.7 1.0 N C:TRP295 5.0 51.0 1.0

Calcium binding site 5 out of 11 in the A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 5 of A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009 within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca508 b:75.9 occ:1.00 O C:HOH756 2.2 51.7 1.0 OD1 C:ASP213 2.3 38.8 1.0 O C:HOH758 2.4 43.3 1.0 O C:HOH668 2.4 45.0 1.0 O C:HOH755 2.4 47.5 1.0 O B:HOH791 2.4 50.3 1.0 CG C:ASP213 3.0 40.6 1.0 OD2 C:ASP213 3.1 40.6 1.0 HD22 B:ASN450 3.8 66.0 1.0 H C:THR214 4.0 34.8 1.0 O C:THR214 4.2 37.1 1.0 O C:HOH757 4.2 56.0 1.0 HG2 E:GLU309 4.2 68.7 1.0 O3 C:NO3511 4.2 49.0 1.0 HA C:ASP213 4.3 41.6 1.0 O C:HOH722 4.3 53.0 1.0 HG3 E:GLU309 4.4 68.7 1.0 CB C:ASP213 4.4 41.0 1.0 HG23 C:THR261 4.5 51.8 1.0 HB3 E:GLU309 4.6 55.0 1.0 OD1 B:ASN450 4.6 73.7 1.0 ND2 B:ASN450 4.7 55.0 1.0 O C:HOH707 4.7 49.6 1.0 CG E:GLU309 4.7 57.3 1.0 HB C:VAL262 4.8 35.2 1.0 N C:THR214 4.8 29.0 1.0 CA C:ASP213 4.9 34.7 1.0 HB2 C:ASP213 4.9 49.2 1.0 H C:VAL262 4.9 30.4 1.0

Calcium binding site 6 out of 11 in the A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 6 of A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009 within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca506 b:33.2 occ:1.00 O D:GLY347 2.2 31.8 1.0 O D:ASP297 2.3 33.7 1.0 O D:ASN293 2.3 33.9 1.0 O D:HOH782 2.4 36.1 1.0 OD2 D:ASP324 2.4 35.9 1.0 O D:GLY345 2.5 32.4 1.0 HA D:ALA298 3.4 42.8 1.0 C D:GLY347 3.4 31.2 1.0 C D:GLY345 3.5 43.5 1.0 C D:ASP297 3.5 32.1 1.0 HA3 D:GLY348 3.5 37.7 1.0 CG D:ASP324 3.5 33.5 1.0 C D:ASN293 3.5 25.9 1.0 HA D:LEU294 3.6 37.4 1.0 HA2 D:GLY345 3.6 43.1 1.0 H D:ASP297 3.7 35.0 1.0 O D:HOH765 4.0 28.7 1.0 HB3 D:ASN293 4.0 41.1 1.0 HA2 D:GLY348 4.0 37.7 1.0 HB3 D:ASP324 4.0 38.7 1.0 CA D:GLY348 4.1 31.4 1.0 CA D:GLY345 4.1 36.0 1.0 N D:GLY348 4.2 32.7 1.0 CA D:ALA298 4.2 35.7 1.0 N D:ALA298 4.2 34.3 1.0 CB D:ASP324 4.3 32.2 1.0 C D:GLU346 4.3 34.0 1.0 N D:GLY347 4.3 31.4 1.0 CA D:LEU294 4.3 31.2 1.0 OD1 D:ASP324 4.4 30.5 1.0 N D:LEU294 4.4 29.9 1.0 HB2 D:ASP324 4.4 38.7 1.0 N D:ASP297 4.4 29.2 1.0 N D:GLU346 4.5 37.7 1.0 H D:ASN293 4.5 34.2 1.0 CA D:GLY347 4.5 35.0 1.0 O D:GLU346 4.5 40.5 1.0 HD23 D:LEU294 4.5 40.1 1.0 CA D:ASP297 4.5 32.7 1.0 CA D:ASN293 4.5 29.3 1.0 HA D:GLU346 4.5 42.3 1.0 H D:GLY347 4.6 37.6 1.0 O D:LYS344 4.6 35.9 1.0 HD2 D:PRO326 4.6 52.3 1.0 HA3 D:GLY345 4.6 43.1 1.0 CB D:ASN293 4.7 34.3 1.0 HG23 D:THR292 4.7 29.2 1.0 CA D:GLU346 4.7 35.3 1.0 N D:ASN293 4.7 28.5 1.0 C D:LEU294 4.7 34.6 1.0 O D:PRO326 4.8 34.7 1.0 HG22 D:THR292 4.8 29.2 1.0 HB3 D:ASP297 4.8 38.1 1.0 HB2 D:ALA298 4.8 43.9 1.0 H D:TRP295 4.8 40.5 1.0 N D:TRP295 5.0 33.8 1.0

Calcium binding site 7 out of 11 in the A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 7 of A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009 within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca507 b:55.2 occ:1.00 O D:HOH780 2.2 28.7 1.0 O D:HOH781 2.2 33.8 1.0 O D:HOH812 2.2 29.5 1.0 OE1 D:GLN258 2.3 34.0 1.0 O D:HOH663 2.4 28.3 1.0 HE22 D:GLN258 3.0 42.8 1.0 CD D:GLN258 3.2 27.7 1.0 NE2 D:GLN258 3.4 35.7 1.0 O D:HOH675 4.2 32.6 1.0 O D:HOH661 4.2 41.0 1.0 HG D:SER236 4.2 35.0 1.0 HH12 D:ARG264 4.3 32.5 1.0 HE21 D:GLN258 4.3 42.8 1.0 O D:HOH700 4.3 41.2 1.0 OE2 D:GLU256 4.4 25.4 1.0 OE1 D:GLN263 4.6 25.8 1.0 OG D:SER236 4.6 29.2 1.0 CG D:GLN258 4.6 23.7 1.0 HG3 D:GLN263 4.7 29.0 1.0 HG3 D:GLN258 4.8 28.5 1.0 O D:HOH726 4.9 43.9 1.0

Calcium binding site 8 out of 11 in the A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 8 of A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009 within 5.0Å range: probe atom residue distance (Å) B Occ E:Ca509 b:32.6 occ:1.00 O E:GLY347 2.3 27.7 1.0 O E:ASN293 2.4 31.7 1.0 O E:ASP297 2.4 37.4 1.0 OD2 E:ASP324 2.4 33.8 1.0 O E:HOH761 2.4 34.6 1.0 O E:GLY345 2.5 35.0 1.0 HA E:ALA298 3.4 39.1 1.0 C E:GLY345 3.5 29.6 1.0 C E:GLY347 3.5 34.2 1.0 C E:ASP297 3.5 26.5 1.0 CG E:ASP324 3.5 42.5 1.0 HA3 E:GLY348 3.6 37.6 1.0 HA2 E:GLY345 3.6 36.8 1.0 C E:ASN293 3.6 29.4 1.0 HA E:LEU294 3.6 33.1 1.0 H E:ASP297 3.7 37.4 1.0 O E:HOH613 3.8 31.0 1.0 HA2 E:GLY348 4.0 37.6 1.0 HB3 E:ASP324 4.0 43.3 1.0 HB3 E:ASN293 4.0 29.2 1.0 CA E:GLY345 4.1 30.7 1.0 CA E:GLY348 4.1 31.4 1.0 CA E:ALA298 4.2 32.6 1.0 N E:ALA298 4.2 29.9 1.0 N E:GLY348 4.3 36.4 1.0 CB E:ASP324 4.3 36.1 1.0 C E:GLU346 4.3 43.6 1.0 CA E:LEU294 4.3 27.6 1.0 N E:GLY347 4.3 36.6 1.0 N E:ASP297 4.4 31.2 1.0 N E:LEU294 4.4 27.4 1.0 H E:ASN293 4.4 37.8 1.0 OD1 E:ASP324 4.4 28.6 1.0 HB2 E:ASP324 4.4 43.3 1.0 N E:GLU346 4.5 31.2 1.0 HD23 E:LEU294 4.5 40.9 1.0 HG22 E:THR292 4.5 31.9 1.0 O E:GLU346 4.5 32.3 1.0 HA3 E:GLY345 4.5 36.8 1.0 CA E:ASP297 4.5 29.3 1.0 CA E:GLY347 4.5 29.3 1.0 CA E:ASN293 4.6 26.7 1.0 HA E:GLU346 4.6 50.9 1.0 H E:GLY347 4.6 43.9 1.0 HD2 E:PRO326 4.6 42.0 1.0 C E:LEU294 4.6 30.5 1.0 O E:LYS344 4.7 34.9 1.0 N E:ASN293 4.7 31.6 1.0 CA E:GLU346 4.7 42.4 1.0 CB E:ASN293 4.7 24.3 1.0 O E:PRO326 4.8 35.6 1.0 HG23 E:THR292 4.8 31.9 1.0 H E:TRP295 4.8 28.6 1.0 HB2 E:ALA298 4.8 43.0 1.0 HB3 E:ASP297 4.9 33.4 1.0 N E:TRP295 4.9 23.9 1.0

Calcium binding site 9 out of 11 in the A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 9 of A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009 within 5.0Å range: probe atom residue distance (Å) B Occ E:Ca510 b:69.0 occ:1.00 OE1 E:GLN258 2.3 40.9 1.0 O C:HOH776 2.3 38.7 1.0 O E:HOH619 2.3 39.5 1.0 O E:HOH601 2.4 41.6 1.0 O E:HOH629 2.4 39.8 1.0 O E:HOH785 2.4 41.4 1.0 HE22 E:GLN258 3.2 54.0 1.0 CD E:GLN258 3.3 38.8 1.0 NE2 E:GLN258 3.6 45.0 1.0 HG E:SER236 3.9 34.9 1.0 O C:HOH741 3.9 47.5 1.0 OE2 E:GLU256 4.0 39.8 1.0 HE21 E:GLN263 4.0 34.2 1.0 HH12 E:ARG264 4.1 40.2 1.0 O E:HOH670 4.2 37.9 1.0 O C:HOH679 4.3 46.2 1.0 OG E:SER236 4.3 29.1 1.0 O C:GLN263 4.3 38.5 1.0 HE21 E:GLN258 4.5 54.0 1.0 HG3 E:GLN263 4.5 33.0 1.0 HA C:GLN263 4.5 40.3 1.0 OE1 C:GLN263 4.5 37.7 1.0 CG E:GLN258 4.6 31.6 1.0 HG3 E:GLN258 4.7 37.9 1.0 NE2 E:GLN263 4.7 28.5 1.0 HB3 C:GLN263 4.8 31.3 1.0 NH1 E:ARG264 4.8 33.6 1.0

Calcium binding site 10 out of 11 in the A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 10 of A Subtype N10 Neuraminidase-Like Protein of A/Little Yellow-Shouldered Bat/Guatemala/164/2009 within 5.0Å range: probe atom residue distance (Å) B Occ F:Ca510 b:22.8 occ:1.00 O F:GLY347 2.2 20.0 1.0 O F:ASN293 2.3 25.0 1.0 O F:HOH768 2.4 22.9 1.0 O F:GLY345 2.4 26.3 1.0 OD2 F:ASP324 2.4 19.9 1.0 O F:ASP297 2.4 25.3 1.0 HA F:ALA298 3.4 22.9 1.0 C F:GLY347 3.4 21.9 1.0 C F:GLY345 3.4 30.8 1.0 C F:ASP297 3.5 29.4 1.0 CG F:ASP324 3.6 30.1 1.0 HA3 F:GLY348 3.6 29.8 1.0 C F:ASN293 3.6 21.4 1.0 HA2 F:GLY345 3.6 33.8 1.0 H F:ASP297 3.7 29.9 1.0 HA F:LEU294 3.7 25.6 1.0 HB3 F:ASP324 4.0 23.4 1.0 O F:HOH602 4.0 21.0 1.0 HB3 F:ASN293 4.1 30.3 1.0 CA F:GLY345 4.1 28.2 1.0 HA2 F:GLY348 4.1 29.8 1.0 CA F:GLY348 4.1 24.9 1.0 CA F:ALA298 4.2 19.1 1.0 N F:GLY348 4.2 21.2 1.0 C F:GLU346 4.2 30.2 1.0 N F:GLY347 4.2 29.2 1.0 N F:ALA298 4.3 20.2 1.0 CB F:ASP324 4.3 19.6 1.0 CA F:LEU294 4.4 21.4 1.0 H F:ASN293 4.4 24.6 1.0 HB2 F:ASP324 4.4 23.4 1.0 N F:ASP297 4.4 24.9 1.0 N F:LEU294 4.4 18.9 1.0 O F:GLU346 4.4 25.8 1.0 CA F:GLY347 4.4 24.9 1.0 N F:GLU346 4.5 25.1 1.0 OD1 F:ASP324 4.5 19.5 1.0 H F:GLY347 4.5 35.0 1.0 HD23 F:LEU294 4.5 21.2 1.0 CA F:ASN293 4.6 21.2 1.0 HA F:GLU346 4.6 37.7 1.0 HD2 F:PRO326 4.6 43.3 1.0 CA F:ASP297 4.6 22.6 1.0 HA3 F:GLY345 4.6 33.8 1.0 O F:LYS344 4.7 25.6 1.0 CA F:GLU346 4.7 31.5 1.0 N F:ASN293 4.7 20.5 1.0 HG22 F:THR292 4.7 29.8 1.0 C F:LEU294 4.7 22.9 1.0 HG23 F:THR292 4.8 29.8 1.0 CB F:ASN293 4.8 25.3 1.0 HB2 F:ALA298 4.8 26.7 1.0 O F:PRO326 4.9 25.5 1.0 H F:TRP295 4.9 30.9 1.0 HA3 F:GLY347 5.0 29.9 1.0 HB3 F:ASP297 5.0 20.4 1.0

X.Zhu, H.Yang, Z.Guo, W.Yu, P.J.Carney, Y.Li, L.M.Chen, J.C.Paulson, R.O.Donis, S.Tong, J.Stevens, I.A.Wilson. Crystal Structures of Two Subtype N10 Neuraminidase-Like Proteins From Bat Influenza A Viruses Reveal A Diverged Putative Active Site. Proc.Natl.Acad.Sci.Usa V. 109 18903 2012.
ISSN: ISSN 0027-8424
PubMed: 23012478
DOI: 10.1073/PNAS.1212579109