Atomistry » Calcium » PDB 4hvk-4i9x » 4i18
Atomistry »
  Calcium »
    PDB 4hvk-4i9x »
      4i18 »

Calcium in PDB 4i18: Crystal Structure of Human Prolactin Receptor Complexed with Fab Fragment

Protein crystallography data

The structure of Crystal Structure of Human Prolactin Receptor Complexed with Fab Fragment, PDB code: 4i18 was solved by E.M.Duguid, S.Mukherjee, J.L.Kouadio, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.51 / 3.24
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 285.826, 285.826, 62.248, 90.00, 90.00, 120.00
R / Rfree (%) 19.1 / 24.6

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Human Prolactin Receptor Complexed with Fab Fragment (pdb code 4i18). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of Human Prolactin Receptor Complexed with Fab Fragment, PDB code: 4i18:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 4i18

Go back to Calcium Binding Sites List in 4i18
Calcium binding site 1 out of 2 in the Crystal Structure of Human Prolactin Receptor Complexed with Fab Fragment


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Human Prolactin Receptor Complexed with Fab Fragment within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Ca301

b:52.2
occ:1.00
OG H:SER78 1.9 46.9 1.0
OG A:SER78 2.5 41.4 1.0
CB H:SER78 3.1 41.6 1.0
OD1 H:ASP76 3.3 58.5 1.0
CB A:SER78 3.3 40.7 1.0
CA H:SER78 4.2 41.9 1.0
N H:SER78 4.2 44.1 1.0
CG H:ASP76 4.3 53.4 1.0
OD1 A:ASP76 4.4 50.2 1.0
OD2 H:ASP76 4.5 48.9 1.0
OD2 A:ASP76 4.6 58.4 1.0
CA A:SER78 4.8 39.0 1.0
CG A:ASP76 5.0 49.9 1.0

Calcium binding site 2 out of 2 in 4i18

Go back to Calcium Binding Sites List in 4i18
Calcium binding site 2 out of 2 in the Crystal Structure of Human Prolactin Receptor Complexed with Fab Fragment


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of Human Prolactin Receptor Complexed with Fab Fragment within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca301

b:53.4
occ:1.00
OD2 B:ASP2 3.2 50.8 1.0
N B:TYR95 3.5 40.2 1.0
OG B:SER94 3.8 40.9 1.0
CB B:TYR95 4.0 40.0 1.0
CG B:ASP2 4.1 47.8 1.0
CA B:SER94 4.1 40.7 1.0
N B:TYR96 4.2 40.5 1.0
CA B:TYR95 4.3 38.9 1.0
C B:SER94 4.3 40.8 1.0
CD2 B:TYR96 4.3 39.3 1.0
CB B:SER94 4.4 40.8 1.0
OD1 B:ASP2 4.5 46.8 1.0
CB R:PRO196 4.7 32.9 1.0
C B:TYR95 4.8 39.4 1.0
CD1 B:ILE3 4.9 47.7 1.0
CE2 B:TYR96 4.9 40.2 1.0
CG R:PRO196 4.9 32.9 1.0

Reference:

S.S.Rizk, J.L.Kouadio, A.Szymborska, E.M.Duguid, S.Mukherjee, J.Zheng, C.V.Clevenger, A.A.Kossiakoff. Engineering Synthetic Antigen Binders For Allosteric Inhibition of Prolactin Receptor Signaling To Be Published.
Page generated: Sun Jul 14 07:57:16 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy