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Calcium in PDB 4ixo: X-Ray Structure of Nifs-Like Protein From Rickettsia Africae Esf-5

Protein crystallography data

The structure of X-Ray Structure of Nifs-Like Protein From Rickettsia Africae Esf-5, PDB code: 4ixo was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.29 / 2.20
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 57.020, 91.020, 72.620, 90.00, 93.72, 90.00
R / Rfree (%) 16.2 / 20.5

Calcium Binding Sites:

The binding sites of Calcium atom in the X-Ray Structure of Nifs-Like Protein From Rickettsia Africae Esf-5 (pdb code 4ixo). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the X-Ray Structure of Nifs-Like Protein From Rickettsia Africae Esf-5, PDB code: 4ixo:

Calcium binding site 1 out of 1 in 4ixo

Go back to Calcium Binding Sites List in 4ixo
Calcium binding site 1 out of 1 in the X-Ray Structure of Nifs-Like Protein From Rickettsia Africae Esf-5


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of X-Ray Structure of Nifs-Like Protein From Rickettsia Africae Esf-5 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca402

b:32.5
occ:1.00
O B:HOH651 2.3 26.2 1.0
O B:HOH581 2.3 22.8 1.0
OD1 B:ASP368 2.5 27.9 1.0
O B:HOH619 2.6 22.5 1.0
O B:HOH616 2.6 24.3 1.0
OD2 B:ASP368 2.6 28.0 1.0
O B:HOH626 2.6 29.9 1.0
CG B:ASP368 2.9 27.8 1.0
CB B:ASP368 4.4 27.1 1.0

Reference:

Seattle Structural Genomics Center For Infectious Disease(Ssgcid), J.Abendroth, B.Sankaran, D.Fox Iii, D.Lorimer, T.E.Edwards. X-Ray Structure of Nifs-Like Protein From Rickettsia Africae Esf-5 To Be Published.
Page generated: Tue Jul 8 23:03:13 2025

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