Atomistry » Calcium » PDB 4p4i-4pjs » 4p4i
Atomistry »
  Calcium »
    PDB 4p4i-4pjs »
      4p4i »

Calcium in PDB 4p4i: X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor T33

Enzymatic activity of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor T33

All present enzymatic activity of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor T33:
3.4.17.21;

Protein crystallography data

The structure of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor T33, PDB code: 4p4i was solved by C.Barinka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.69 / 1.87
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 102.309, 130.458, 159.661, 90.00, 90.00, 90.00
R / Rfree (%) 15.2 / 17

Other elements in 4p4i:

The structure of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor T33 also contains other interesting chemical elements:

Zinc (Zn) 2 atoms
Chlorine (Cl) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor T33 (pdb code 4p4i). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor T33, PDB code: 4p4i:

Calcium binding site 1 out of 1 in 4p4i

Go back to Calcium Binding Sites List in 4p4i
Calcium binding site 1 out of 1 in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor T33


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor T33 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca816

b:17.7
occ:1.00
 OE2 A:GLU436 2.3 17.9 1.0
O A:TYR272 2.4 17.4 1.0
O A:HOH1005 2.4 17.6 1.0
O A:THR269 2.4 17.0 1.0
OE1 A:GLU433 2.5 18.1 1.0
OE2 A:GLU433 2.5 16.8 1.0
OG1 A:THR269 2.5 17.9 1.0
CD A:GLU433 2.8 18.2 1.0
C A:THR269 3.3 17.1 1.0
CB A:THR269 3.3 16.5 1.0
CD A:GLU436 3.4 17.6 1.0
C A:TYR272 3.5 16.9 1.0
OE1 A:GLU436 3.9 17.9 1.0
CA A:THR269 3.9 18.0 1.0
N A:TYR272 4.0 16.3 1.0
N A:ALA274 4.2 18.1 1.0
CB A:ASP266 4.2 18.0 1.0
CA A:PRO273 4.2 18.7 1.0
N A:PRO270 4.3 17.3 1.0
CG A:GLU433 4.3 18.8 1.0
N A:PRO273 4.3 18.1 1.0
CA A:TYR272 4.4 17.9 1.0
C A:PRO273 4.4 19.0 1.0
N A:ASP266 4.5 17.3 1.0
CA A:PRO270 4.5 17.3 1.0
O A:ASP266 4.5 18.4 1.0
N A:GLY271 4.5 18.4 1.0
O A:ALA264 4.6 19.4 1.0
N A:THR269 4.6 18.1 1.0
CG A:GLU436 4.7 17.7 1.0
CG2 A:THR269 4.7 19.0 1.0
OD2 A:ASP266 4.8 19.8 1.0
C A:PRO270 4.8 18.1 1.0
CA A:ASP266 4.9 17.7 1.0
CB A:GLU436 4.9 17.6 1.0
CB A:ALA274 4.9 19.6 1.0
C A:GLY271 5.0 19.0 1.0
CA A:GLU433 5.0 16.1 1.0

Reference:

C.Barinka, C.Barinka. N/A N/A.
Page generated: Wed Jul 9 01:14:05 2025

Last articles

Mg in 5MH5
Mg in 5MGY
Mg in 5MFM
Mg in 5MH1
Mg in 5MGA
Mg in 5M73
Mg in 5MFL
Mg in 5MF4
Mg in 5MF5
Mg in 5MCP
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy