Calcium in PDB 4xdq: Crystal Structure of A Glycoside Hydrolase Family Protein (RV0315 Ortholog) From Mycobacterium Thermorestibile

The structure of Crystal Structure of A Glycoside Hydrolase Family Protein (RV0315 Ortholog) From Mycobacterium Thermorestibile, PDB code: 4xdq was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 1.35
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	74.550, 74.550, 95.530, 90.00, 90.00, 90.00
R / Rfree (%)	12.5 / 14.8

The structure of Crystal Structure of A Glycoside Hydrolase Family Protein (RV0315 Ortholog) From Mycobacterium Thermorestibile also contains other interesting chemical elements:

Cadmium	(Cd)	1 atom
Magnesium	(Mg)	1 atom
Chlorine	(Cl)	2 atoms

The binding sites of Calcium atom in the Crystal Structure of A Glycoside Hydrolase Family Protein (RV0315 Ortholog) From Mycobacterium Thermorestibile (pdb code 4xdq). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of A Glycoside Hydrolase Family Protein (RV0315 Ortholog) From Mycobacterium Thermorestibile, PDB code: 4xdq:

Calcium binding site 1 out of 1 in the Crystal Structure of A Glycoside Hydrolase Family Protein (RV0315 Ortholog) From Mycobacterium Thermorestibile


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of A Glycoside Hydrolase Family Protein (RV0315 Ortholog) From Mycobacterium Thermorestibile within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca301 b:9.1 occ:1.00 O A:GLY79 2.3 9.8 1.0 O A:HOH408 2.3 9.9 1.0 O A:GLU28 2.3 9.5 1.0 O A:ASP254 2.4 9.4 1.0 OD1 A:ASP254 2.4 9.9 1.0 O A:HOH435 2.4 18.1 1.0 O A:HOH439 2.5 18.8 1.0 C A:ASP254 3.4 8.9 1.0 C A:GLY79 3.4 9.6 1.0 C A:GLU28 3.5 9.1 1.0 CG A:ASP254 3.6 9.3 1.0 CA A:ASP254 3.9 8.7 1.0 CA A:GLY79 3.9 10.9 1.0 CA A:GLU28 4.2 8.9 1.0 CB A:ASP254 4.3 8.7 1.0 O A:PHE29 4.4 11.3 1.0 CB A:GLU28 4.4 9.6 1.0 C A:PHE29 4.5 10.7 1.0 N A:TRP255 4.5 8.8 1.0 OD2 A:ASP254 4.5 9.1 1.0 N A:PHE29 4.5 9.2 1.0 N A:ASN80 4.5 9.6 1.0 CB A:PHE29 4.6 10.1 1.0 OE1 A:GLU28 4.6 10.8 1.0 CB A:TRP255 4.6 9.1 1.0 CD1 A:TRP255 4.7 9.6 1.0 CA A:PHE29 4.7 9.8 1.0 CD A:CD302 4.8 11.6 1.0 CA A:TRP255 4.9 8.4 1.0 ND2 A:ASN80 4.9 8.6 1.0 OD1 A:ASP30 4.9 25.4 1.0 CA A:ASN80 4.9 9.4 1.0 N A:ASP30 4.9 12.3 1.0

T.E.Edwards, J.Abendroth, Seattle Structural Genomics Center For Infectious Disease. Crystal Structure of A Glycoside Hydrolase Family Protein (RV0315 Ortholog) From Mycobacterium Thermorestibile To Be Published.