Calcium in PDB 5c0i: Hal-A02 Carrying Rqfgpdfpti

The structure of Hal-A02 Carrying Rqfgpdfpti, PDB code: 5c0i was solved by P.J.Rizkallah, A.M.Bulek, D.K.Cole, A.K.Sewell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.30 / 1.53
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	55.700, 79.740, 58.080, 90.00, 115.67, 90.00
R / Rfree (%)	15.9 / 19.1

The binding sites of Calcium atom in the Hal-A02 Carrying Rqfgpdfpti (pdb code 5c0i). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Hal-A02 Carrying Rqfgpdfpti, PDB code: 5c0i:

Calcium binding site 1 out of 1 in the Hal-A02 Carrying Rqfgpdfpti


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Hal-A02 Carrying Rqfgpdfpti within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca101 b:53.4 occ:1.00 O B:HOH256 2.4 44.4 1.0 O B:HOH258 2.5 37.9 1.0 O B:HOH267 2.5 44.2 1.0 O B:LEU87 2.5 43.2 1.0 O B:HIS84 2.6 30.7 1.0 OD1 B:ASN83 2.6 37.0 1.0 CG B:ASN83 3.3 35.3 1.0 C B:HIS84 3.5 28.9 1.0 ND2 B:ASN83 3.5 39.4 1.0 C B:LEU87 3.7 43.2 1.0 N B:HIS84 4.0 27.8 1.0 CA B:VAL85 4.1 32.0 1.0 N B:VAL85 4.2 28.9 1.0 N B:LEU87 4.3 35.6 1.0 C B:VAL85 4.4 33.3 1.0 CA B:HIS84 4.4 26.2 1.0 CA B:LEU87 4.4 39.1 1.0 O B:VAL85 4.5 35.8 1.0 CB B:LEU87 4.5 36.9 1.0 CB B:ASN83 4.7 31.8 1.0 N B:SER88 4.8 48.1 1.0 O B:HOH203 4.8 47.3 1.0 C B:SER88 4.9 52.5 1.0 CA B:SER88 4.9 52.1 1.0 C B:ASN83 5.0 25.9 1.0

D.K.Cole, A.M.Bulek, G.Dolton, A.J.Schauenberg, B.Szomolay, W.Rittase, A.Trimby, P.Jothikumar, A.Fuller, A.Skowera, J.Rossjohn, C.Zhu, J.J.Miles, M.Peakman, L.Wooldridge, P.J.Rizkallah, A.K.Sewell. Hotspot Autoimmune T Cell Receptor Binding Underlies Pathogen and Insulin Peptide Cross-Reactivity. J.Clin.Invest. V. 126 2191 2016.
ISSN: ISSN 0021-9738
PubMed: 27183389
DOI: 10.1172/JCI85679