Calcium in PDB 5d9x: Dehydroascorbate Reductase Complexed with Gsh

The structure of Dehydroascorbate Reductase Complexed with Gsh, PDB code: 5d9x was solved by H.Do, J.H.Lee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.48 / 1.68
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	46.890, 47.600, 51.790, 90.00, 107.00, 90.00
R / Rfree (%)	19.2 / 22.7

The binding sites of Calcium atom in the Dehydroascorbate Reductase Complexed with Gsh (pdb code 5d9x). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Dehydroascorbate Reductase Complexed with Gsh, PDB code: 5d9x:

Calcium binding site 1 out of 1 in the Dehydroascorbate Reductase Complexed with Gsh


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Dehydroascorbate Reductase Complexed with Gsh within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca302 b:20.9 occ:1.00 N A:LYS200 3.3 16.7 1.0 NZ A:LYS197 3.5 15.8 1.0 CG A:LYS200 3.6 16.0 1.0 CB A:LYS200 3.9 17.8 1.0 CA A:ALA199 4.0 17.7 1.0 C A:ALA199 4.1 16.7 1.0 CD A:LYS200 4.2 15.8 1.0 CA A:LYS200 4.2 14.3 1.0 CE A:LYS200 4.3 20.3 1.0 O A:HOH458 4.3 21.4 1.0 CB A:ALA199 4.5 18.1 1.0 OE1 A:GLU201 4.5 22.6 1.0 OH A:TYR159 4.6 19.1 1.0 CE A:LYS197 4.9 16.3 1.0 O A:ALA198 4.9 18.8 1.0

H.Do, I.S.Kim, B.W.Jeon, C.W.Lee, A.K.Park, A.R.Wi, S.C.Shin, H.Park, Y.S.Kim, H.S.Yoon, H.W.Kim, J.H.Lee. Structural Understanding of the Recycling of Oxidized Ascorbate By Dehydroascorbate Reductase (Osdhar) From Oryza Sativa L. Japonica Sci Rep V. 6 19498 2016.
ISSN: ESSN 2045-2322
PubMed: 26775680
DOI: 10.1038/SREP19498